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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.293 C 0.207 G 0.207 T 0.293 

MOTIF 1-GYAAATAW STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 137 P= 1.7e-004
 0.038772 0.030185 0.930505 0.000538
 0.000538 0.347868 0.000379 0.651215
 0.923850 0.026641 0.048972 0.000538
 0.998704 0.000379 0.000379 0.000538
 0.998704 0.000379 0.000379 0.000538
 0.000538 0.329969 0.000379 0.669114
 0.973280 0.025803 0.000379 0.000538
 0.484610 0.069118 0.079189 0.367083

MOTIF 2-CCTATCGC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 3.0e-001
 0.062906 0.751491 0.122698 0.062906
 0.063003 0.811940 0.062152 0.062906
 0.123452 0.062152 0.122698 0.691699
 0.873143 0.001800 0.062152 0.062906
 0.002554 0.062152 0.001800 0.933495
 0.002554 0.993093 0.001800 0.002554
 0.027537 0.001800 0.968109 0.002554
 0.002554 0.993093 0.001800 0.002554

MOTIF 3-CAACTCGT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 15 P= 5.0e-001
 0.002647 0.930296 0.001865 0.065192
 0.905185 0.027757 0.001865 0.065192
 0.931077 0.001865 0.064411 0.002647
 0.002647 0.966950 0.027757 0.002647
 0.002647 0.064411 0.127158 0.805785
 0.065192 0.930296 0.001865 0.002647
 0.127939 0.001865 0.867549 0.002647
 0.127939 0.001865 0.127158 0.743038

MOTIF 4-CACTCGAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 7.6e-001
 0.002985 0.991925 0.002104 0.002985
 0.780914 0.143441 0.002104 0.073541
 0.002985 0.991925 0.002104 0.002985
 0.002985 0.002104 0.002104 0.992807
 0.002985 0.921370 0.002104 0.073541
 0.002985 0.002104 0.921370 0.073541
 0.922251 0.002104 0.072659 0.002985
 0.710132 0.143441 0.002104 0.144323

MOTIF 5-TATGTACA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 1.0e+000
 0.002590 0.001825 0.001825 0.993759
 0.993759 0.001825 0.001825 0.002590
 0.027931 0.001825 0.063041 0.907202
 0.002590 0.001825 0.992994 0.002590
 0.002590 0.001825 0.063041 0.932543
 0.993759 0.001825 0.001825 0.002590
 0.002590 0.962386 0.032433 0.002590
 0.687091 0.124453 0.063041 0.125416

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/schlank.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_schlank/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n04.farnam.hpc.yale.internal
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FINALTIME:	1.95 seconds
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