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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.33 C 0.17 G 0.17 T 0.33 

MOTIF 1-ATGTTTAC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 64 P= 1.2e-001
 0.799768 0.076515 0.009879 0.113837
 0.026417 0.000619 0.011058 0.961905
 0.107103 0.051135 0.840563 0.001200
 0.026417 0.011058 0.011058 0.951466
 0.011639 0.000619 0.051298 0.936443
 0.007373 0.000619 0.054932 0.937076
 0.847005 0.025837 0.100741 0.026417
 0.026417 0.886989 0.000619 0.085975

MOTIF 2-AAATATTT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 73 P= 5.0e-001
 0.919567 0.036263 0.009571 0.034599
 0.880266 0.044264 0.007155 0.068315
 0.874166 0.038617 0.084086 0.003131
 0.001967 0.058922 0.007155 0.931956
 0.931956 0.007155 0.058922 0.001967
 0.003131 0.084086 0.038617 0.874166
 0.068315 0.007155 0.044264 0.880266
 0.034599 0.009571 0.036263 0.919567

MOTIF 3-AAACAAAT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 44 P= 6.7e-001
 0.908143 0.001193 0.001193 0.089471
 0.980866 0.001193 0.015629 0.002312
 0.874457 0.076268 0.001193 0.048082
 0.002312 0.994183 0.001193 0.002312
 0.713965 0.082923 0.082923 0.120189
 0.995302 0.001193 0.001193 0.002312
 0.995302 0.001193 0.001193 0.002312
 0.002312 0.001193 0.001193 0.995302

MOTIF 4-AGTGCATC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 22 P= 1.0e+000
 0.995579 0.001123 0.001123 0.002176
 0.002176 0.001123 0.948797 0.047904
 0.002176 0.001123 0.092580 0.904121
 0.002176 0.001123 0.948797 0.047904
 0.139804 0.811169 0.001123 0.047904
 0.995579 0.001123 0.001123 0.002176
 0.047904 0.230208 0.046851 0.675036
 0.185977 0.688083 0.123764 0.002176

MOTIF 5-WCGATCGW STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 28 P= 1.0e+000
 0.458242 0.030576 0.082731 0.428451
 0.149177 0.608278 0.027965 0.214580
 0.034287 0.014318 0.922713 0.028682
 0.942771 0.000670 0.000670 0.055889
 0.055889 0.000670 0.000670 0.942771
 0.028682 0.922713 0.014318 0.034287
 0.214580 0.027965 0.608278 0.149177
 0.428451 0.082731 0.030576 0.458242

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/sc.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_sc/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n07.farnam.hpc.yale.internal
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FINALTIME:	1.62 seconds
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