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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.315 C 0.185 G 0.185 T 0.315 

MOTIF 1-GATAAGAW STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 64 P= 1.2e-001
 0.000910 0.000533 0.997647 0.000910
 0.964376 0.000533 0.000533 0.034558
 0.000910 0.000533 0.020539 0.978018
 0.973759 0.000533 0.000533 0.025175
 0.947946 0.010536 0.040608 0.000910
 0.000910 0.080943 0.857027 0.061120
 0.752965 0.197235 0.008815 0.040985
 0.519596 0.036930 0.152639 0.290835

MOTIF 2-CCATAAAA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 29 P= 1.7e-001
 0.001412 0.996348 0.000827 0.001412
 0.001412 0.916532 0.000827 0.081229
 0.872644 0.031875 0.063022 0.032460
 0.001412 0.000827 0.000827 0.996933
 0.841296 0.094270 0.000827 0.063607
 0.765441 0.013680 0.094270 0.126609
 0.980204 0.017556 0.000827 0.001412
 0.797170 0.109066 0.031875 0.061889

MOTIF 3-AATAAAAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 112 P= 1.8e-001
 0.996567 0.000926 0.000926 0.001581
 0.889029 0.035681 0.060809 0.014481
 0.001581 0.000926 0.033511 0.963982
 0.928566 0.012266 0.024096 0.035073
 0.947786 0.014953 0.035681 0.001581
 0.871502 0.011166 0.007574 0.109758
 0.708572 0.095006 0.056902 0.139519
 0.693209 0.018304 0.247390 0.041097

MOTIF 4-ATTTATGA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 31 P= 7.6e-001
 0.890713 0.034525 0.029902 0.044860
 0.100492 0.029902 0.118034 0.751572
 0.059293 0.059122 0.012833 0.868752
 0.001325 0.029902 0.006347 0.962426
 0.997123 0.000776 0.000776 0.001325
 0.118393 0.018408 0.029949 0.833250
 0.001325 0.000776 0.996574 0.001325
 0.899702 0.036103 0.038599 0.025596

MOTIF 5-GSCGGMGG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 36 P= 1.0e+000
 0.001139 0.013191 0.899016 0.086653
 0.151508 0.459988 0.312139 0.076364
 0.111741 0.886452 0.000667 0.001139
 0.026187 0.000667 0.946958 0.026187
 0.001139 0.000667 0.771460 0.226733
 0.351933 0.458319 0.000667 0.189080
 0.001139 0.100860 0.896862 0.001139
 0.282969 0.000667 0.690176 0.026187

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/salm.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_salm/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n05.farnam.hpc.yale.internal
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FINALTIME:	1.66 seconds
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