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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.286 C 0.214 G 0.214 T 0.286 

MOTIF 1-AAAATACC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 89 P= 2.3e-003
 0.761797 0.000614 0.200653 0.036937
 0.978070 0.000614 0.020498 0.000818
 0.692266 0.060331 0.040382 0.207021
 0.997954 0.000614 0.000614 0.000818
 0.000818 0.000614 0.000614 0.997954
 0.978102 0.020466 0.000614 0.000818
 0.070028 0.928540 0.000614 0.000818
 0.000818 0.939194 0.000614 0.059374

MOTIF 2-AGTGTGAC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 96 P= 1.2e-002
 0.856132 0.004692 0.053403 0.085773
 0.053511 0.000326 0.941362 0.004801
 0.053530 0.021454 0.021488 0.903528
 0.085773 0.000326 0.909100 0.004801
 0.010982 0.021488 0.011842 0.955689
 0.012656 0.010873 0.953321 0.023150
 0.866570 0.064435 0.058013 0.010982
 0.012656 0.976036 0.000326 0.010982

MOTIF 3-TATCGATA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 93 P= 2.4e-002
 0.128492 0.067538 0.000469 0.803501
 0.998437 0.000469 0.000469 0.000625
 0.000625 0.000469 0.000469 0.998437
 0.000625 0.998282 0.000469 0.000625
 0.000625 0.000469 0.998282 0.000625
 0.998437 0.000469 0.000469 0.000625
 0.000625 0.000469 0.000469 0.998437
 0.803501 0.000469 0.067538 0.128492

MOTIF 4-ATCAGCTG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 55 P= 5.0e-001
 0.921406 0.043318 0.034401 0.000875
 0.251653 0.000657 0.150946 0.596744
 0.043398 0.951010 0.004717 0.000875
 0.997812 0.000657 0.000657 0.000875
 0.000875 0.021884 0.955139 0.022102
 0.022102 0.976366 0.000657 0.000875
 0.000875 0.021884 0.000657 0.976584
 0.000875 0.000657 0.972997 0.025472

MOTIF 5-CTGGCARC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 50 P= 6.7e-001
 0.000910 0.997498 0.000683 0.000910
 0.045131 0.000683 0.022758 0.931428
 0.000910 0.000683 0.997498 0.000910
 0.143333 0.111955 0.743803 0.000910
 0.000910 0.971919 0.000683 0.026489
 0.908852 0.089556 0.000683 0.000910
 0.593295 0.000683 0.405113 0.000910
 0.000910 0.997498 0.000683 0.000910

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/pzg.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_pzg/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n12.farnam.hpc.yale.internal
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FINALTIME:	1.87 seconds
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