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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.321 C 0.179 G 0.179 T 0.321 

MOTIF 1-AGATGGCG STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 33 P= 2.4e-001
 0.882718 0.019756 0.038953 0.058573
 0.000890 0.019725 0.951308 0.028077
 0.763269 0.019725 0.139143 0.077863
 0.118100 0.096636 0.106990 0.678273
 0.053383 0.058181 0.810574 0.077863
 0.077832 0.000497 0.755891 0.165780
 0.077863 0.809569 0.030116 0.082452
 0.090975 0.038953 0.849955 0.020117

MOTIF 2-AGATGAGC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 5.0e-001
 0.896051 0.050828 0.050828 0.002292
 0.002292 0.100535 0.894881 0.002292
 0.895891 0.100535 0.001282 0.002292
 0.002292 0.050828 0.001282 0.945598
 0.101545 0.100535 0.795628 0.002292
 0.846345 0.001282 0.150081 0.002292
 0.002292 0.001282 0.994134 0.002292
 0.201440 0.695733 0.100535 0.002292

MOTIF 3-CACTGAGM STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 25 P= 5.0e-001
 0.002323 0.994055 0.001299 0.002323
 0.743857 0.051511 0.202309 0.002323
 0.002323 0.994055 0.001299 0.002323
 0.102747 0.051511 0.001299 0.844443
 0.002323 0.001299 0.994055 0.002323
 0.995079 0.001299 0.001299 0.002323
 0.002323 0.202309 0.793045 0.002323
 0.441610 0.554767 0.001299 0.002323

MOTIF 4-AACAAATA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 37 P= 7.6e-001
 0.929937 0.000784 0.031103 0.038176
 0.958937 0.031103 0.003568 0.006392
 0.001403 0.996410 0.000784 0.001403
 0.808204 0.092181 0.000784 0.098831
 0.890186 0.047626 0.051778 0.010410
 0.887478 0.008952 0.031103 0.072467
 0.001403 0.055165 0.031103 0.912329
 0.626823 0.153607 0.184171 0.035399

MOTIF 5-ATWTTGTA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 20 P= 7.6e-001
 0.994237 0.001521 0.001521 0.002721
 0.002721 0.001521 0.001521 0.994237
 0.418379 0.178507 0.010256 0.392858
 0.002721 0.001521 0.001521 0.994237
 0.002721 0.001521 0.001521 0.994237
 0.002721 0.001521 0.993037 0.002721
 0.002721 0.001521 0.001521 0.994237
 0.994237 0.001521 0.001521 0.002721

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/pum.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_pum/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n11.farnam.hpc.yale.internal
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FINALTIME:	1.60 seconds
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