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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.277 C 0.223 G 0.223 T 0.277 

MOTIF 1-TAAGCCGM STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 143 P= 1.3e-002
 0.000384 0.048546 0.000310 0.950760
 0.993811 0.005495 0.000310 0.000384
 0.982706 0.009948 0.006962 0.000384
 0.005569 0.000310 0.735001 0.259120
 0.061429 0.822520 0.099470 0.016582
 0.064169 0.632553 0.142936 0.160342
 0.000384 0.016033 0.902342 0.081241
 0.520585 0.384264 0.094767 0.000384

MOTIF 2-ATAATCCC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 39 P= 1.2e-001
 0.606466 0.294382 0.097868 0.001284
 0.001284 0.001037 0.001037 0.996642
 0.996642 0.001037 0.001037 0.001284
 0.899811 0.001037 0.001037 0.098115
 0.001284 0.001037 0.001037 0.996642
 0.130601 0.867078 0.001037 0.001284
 0.001284 0.834487 0.001037 0.163192
 0.001284 0.964222 0.001037 0.033457

MOTIF 3-CAATGCCA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 96 P= 5.0e-001
 0.087671 0.743571 0.118250 0.050508
 0.849436 0.005668 0.133822 0.011074
 0.770777 0.217788 0.000343 0.011091
 0.252192 0.076120 0.000343 0.671344
 0.087102 0.010992 0.834354 0.067551
 0.117268 0.803955 0.021710 0.057067
 0.047464 0.859803 0.092308 0.000425
 0.861956 0.004752 0.132868 0.000425

MOTIF 4-AGTGTCAG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 27 P= 9.5e-001
 0.995842 0.001284 0.001284 0.001590
 0.284805 0.001284 0.672481 0.041430
 0.001590 0.001284 0.041124 0.956002
 0.001590 0.001284 0.955696 0.041430
 0.018082 0.080964 0.041124 0.859829
 0.001590 0.939204 0.017777 0.041430
 0.729504 0.001284 0.041124 0.228087
 0.241144 0.097585 0.659681 0.001590

MOTIF 5-CCTTTTCT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 18 P= 1.0e+000
 0.129147 0.825448 0.001365 0.044039
 0.001690 0.910420 0.086200 0.001690
 0.086525 0.043714 0.001365 0.868396
 0.044039 0.001365 0.001365 0.953231
 0.001690 0.018896 0.043714 0.935700
 0.001690 0.001365 0.043714 0.953231
 0.001690 0.824761 0.171859 0.001690
 0.044039 0.086200 0.043714 0.826047

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/oc.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_oc/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n05.farnam.hpc.yale.internal
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FINALTIME:	1.66 seconds
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