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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.281 C 0.219 G 0.219 T 0.281 

MOTIF 1-CAAAGTCC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 86 P= 4.9e-002
 0.000610 0.861907 0.000477 0.137007
 0.961897 0.000477 0.037017 0.000610
 0.998437 0.000477 0.000477 0.000610
 0.938137 0.015540 0.030651 0.015673
 0.000610 0.000477 0.998303 0.000610
 0.015673 0.000477 0.000477 0.983374
 0.091475 0.634245 0.160165 0.114115
 0.000610 0.998303 0.000477 0.000610

MOTIF 2-AACCAGTT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 27 P= 5.0e-001
 0.865299 0.049884 0.082859 0.001958
 0.994982 0.001530 0.001530 0.001958
 0.001958 0.985305 0.001530 0.011207
 0.001958 0.946200 0.001530 0.050312
 0.655569 0.049884 0.147059 0.147488
 0.001958 0.001530 0.994554 0.001958
 0.001958 0.001530 0.001530 0.994982
 0.001958 0.147059 0.001530 0.849453

MOTIF 3-ATAAAAAC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 38 P= 7.0e-001
 0.934609 0.019936 0.019936 0.025518
 0.025518 0.019936 0.019936 0.934609
 0.934609 0.019936 0.019936 0.025518
 0.934609 0.019936 0.019936 0.025518
 0.934609 0.019936 0.019936 0.025518
 0.934609 0.019936 0.019936 0.025518
 0.934609 0.019936 0.019936 0.025518
 0.025518 0.929027 0.019936 0.025518

MOTIF 4-CCGAGCTG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 8.8e-001
 0.025518 0.929027 0.019936 0.025518
 0.025518 0.929027 0.019936 0.025518
 0.025518 0.019936 0.929027 0.025518
 0.934609 0.019936 0.019936 0.025518
 0.025518 0.019936 0.929027 0.025518
 0.025518 0.929027 0.019936 0.025518
 0.025518 0.019936 0.019936 0.934609
 0.025518 0.019936 0.929027 0.025518

MOTIF 5-AAAGTGCA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 29 P= 9.5e-001
 0.756738 0.154280 0.086927 0.002054
 0.719330 0.124663 0.052333 0.103674
 0.923008 0.001605 0.052333 0.023054
 0.002054 0.001605 0.994286 0.002054
 0.002054 0.001605 0.001605 0.994736
 0.052783 0.001605 0.892830 0.052783
 0.002054 0.943477 0.001605 0.052864
 0.994736 0.001605 0.001605 0.002054

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/nom.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_nom/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n06.farnam.hpc.yale.internal
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FINALTIME:	1.65 seconds
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