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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.312 C 0.188 G 0.188 T 0.312 

MOTIF 1-ATCGATAA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 28 P= 5.0e-001
 0.887586 0.055002 0.055002 0.002410
 0.002410 0.028228 0.001453 0.967910
 0.002410 0.993728 0.001453 0.002410
 0.002410 0.001453 0.993728 0.002410
 0.887586 0.001453 0.055002 0.055959
 0.002410 0.001453 0.001453 0.994684
 0.771734 0.001453 0.116786 0.110027
 0.774163 0.035869 0.187558 0.002410

MOTIF 2-ATTTACAG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 53 P= 8.6e-001
 0.957950 0.005667 0.000802 0.035581
 0.030889 0.089765 0.059920 0.819425
 0.030937 0.000802 0.030361 0.937900
 0.025803 0.050519 0.013039 0.910639
 0.937120 0.030361 0.005193 0.027326
 0.044656 0.868669 0.050519 0.036156
 0.865926 0.060015 0.054834 0.019224
 0.021036 0.119611 0.849241 0.010112

MOTIF 3-TATTTCAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 46 P= 8.8e-001
 0.001952 0.001177 0.001177 0.995695
 0.952324 0.044547 0.001177 0.001952
 0.045322 0.074124 0.039319 0.841235
 0.009089 0.044547 0.024545 0.921818
 0.141323 0.088057 0.001177 0.769443
 0.001952 0.994920 0.001177 0.001952
 0.902284 0.001177 0.001177 0.095362
 0.777437 0.001177 0.001177 0.220209

MOTIF 4-GCGTTGCC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 24 P= 1.0e+000
 0.046076 0.019419 0.844332 0.090172
 0.134695 0.862129 0.001195 0.001981
 0.001981 0.001195 0.994843 0.001981
 0.001981 0.001195 0.001195 0.995630
 0.001981 0.133694 0.001195 0.863130
 0.001981 0.133694 0.862344 0.001981
 0.046006 0.950819 0.001195 0.001981
 0.001981 0.994843 0.001195 0.001981

MOTIF 5-CATCTCTA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 1.0e+000
 0.028355 0.926191 0.017100 0.028355
 0.937445 0.017100 0.017100 0.028355
 0.028355 0.017100 0.017100 0.937445
 0.028355 0.926191 0.017100 0.028355
 0.028355 0.017100 0.017100 0.937445
 0.028355 0.926191 0.017100 0.028355
 0.028355 0.017100 0.017100 0.937445
 0.937445 0.017100 0.017100 0.028355

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/mam.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_mam/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n08.farnam.hpc.yale.internal
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FINALTIME:	1.56 seconds
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