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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.342 C 0.158 G 0.158 T 0.342 

MOTIF 1-AATGGAAA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 59 P= 3.3e-001
 0.921473 0.034673 0.008282 0.035571
 0.890438 0.014807 0.034673 0.060081
 0.051339 0.007258 0.044581 0.896823
 0.169914 0.000774 0.827641 0.001672
 0.001672 0.000774 0.921382 0.076172
 0.880721 0.000774 0.014807 0.103698
 0.894973 0.000774 0.068682 0.035571
 0.880647 0.034673 0.000774 0.083906

MOTIF 2-AGATATTA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 42 P= 5.0e-001
 0.712905 0.089114 0.089114 0.108867
 0.002169 0.001004 0.994658 0.002169
 0.824656 0.001004 0.107702 0.066638
 0.002169 0.001004 0.012853 0.983974
 0.933631 0.019212 0.044988 0.002169
 0.089710 0.068959 0.044988 0.796343
 0.002169 0.001004 0.001004 0.995823
 0.995823 0.001004 0.001004 0.002169

MOTIF 3-CACAGTGG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 7.6e-001
 0.063303 0.872017 0.001377 0.063303
 0.813092 0.001377 0.182556 0.002975
 0.063303 0.932345 0.001377 0.002975
 0.908969 0.001377 0.061705 0.027949
 0.063303 0.001377 0.872017 0.063303
 0.063303 0.001377 0.061705 0.873615
 0.002975 0.001377 0.871823 0.123826
 0.063400 0.001377 0.932248 0.002975

MOTIF 4-AATCAAAT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 7.6e-001
 0.905034 0.001322 0.090789 0.002856
 0.703085 0.001322 0.292738 0.002856
 0.002856 0.001322 0.001322 0.994501
 0.002856 0.992967 0.001322 0.002856
 0.936593 0.001322 0.001322 0.060764
 0.939994 0.001322 0.012398 0.046287
 0.878311 0.117511 0.001322 0.002856
 0.002856 0.001322 0.001322 0.994501

MOTIF 5-ACGATGTT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 29 P= 9.5e-001
 0.980140 0.000891 0.000891 0.018079
 0.080098 0.917088 0.000891 0.001924
 0.198307 0.039914 0.665189 0.096589
 0.988830 0.000891 0.000891 0.009388
 0.040948 0.117962 0.078938 0.762151
 0.001924 0.196387 0.674361 0.127327
 0.001924 0.000891 0.008355 0.988830
 0.079972 0.078938 0.000891 0.840199

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/lz.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_lz/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c23n01.farnam.hpc.yale.internal
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FINALTIME:	1.87 seconds
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