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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.297 C 0.203 G 0.203 T 0.297 

MOTIF 1-TATCGATA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 46 P= 2.5e-002
 0.001269 0.152001 0.000869 0.845862
 0.937355 0.000869 0.060508 0.001269
 0.001269 0.015682 0.030544 0.952505
 0.016083 0.949271 0.003702 0.030944
 0.030944 0.003702 0.949271 0.016083
 0.952505 0.030544 0.015682 0.001269
 0.001269 0.060508 0.000869 0.937355
 0.845862 0.000869 0.152001 0.001269

MOTIF 2-CAGSSCTG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 3.0e-001
 0.002429 0.908281 0.086860 0.002429
 0.994244 0.001663 0.001663 0.002429
 0.030798 0.030032 0.782727 0.156443
 0.002429 0.623124 0.372017 0.002429
 0.002429 0.372017 0.623124 0.002429
 0.156443 0.782727 0.030032 0.030798
 0.002429 0.001663 0.001663 0.994244
 0.002429 0.086860 0.908281 0.002429

MOTIF 3-CCGTTCAC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 29 P= 8.8e-001
 0.001929 0.859516 0.046374 0.092181
 0.001929 0.994821 0.001321 0.001929
 0.137525 0.001321 0.814172 0.046983
 0.001929 0.136917 0.001321 0.859833
 0.001929 0.001321 0.001321 0.995429
 0.001929 0.949768 0.046374 0.001929
 0.905323 0.001321 0.046374 0.046983
 0.137525 0.769118 0.046374 0.046983

MOTIF 4-AATTAAAC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 1.0e+000
 0.993858 0.001775 0.001775 0.002592
 0.963590 0.032044 0.001775 0.002592
 0.002592 0.001775 0.258771 0.736862
 0.002592 0.001775 0.001775 0.993858
 0.993858 0.001775 0.001775 0.002592
 0.838228 0.001775 0.001775 0.158222
 0.811660 0.183973 0.001775 0.002592
 0.002592 0.993041 0.001775 0.002592

MOTIF 5-AACTATCG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 17 P= 1.0e+000
 0.897339 0.001984 0.029998 0.070679
 0.993135 0.001984 0.001984 0.002898
 0.002898 0.992221 0.001984 0.002898
 0.002898 0.001984 0.001984 0.993135
 0.993135 0.001984 0.001984 0.002898
 0.070570 0.001984 0.001984 0.925462
 0.002898 0.992221 0.001984 0.002898
 0.002898 0.001984 0.992221 0.002898

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/luna.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_luna/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n10.farnam.hpc.yale.internal
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FINALTIME:	1.63 seconds
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