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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.297 C 0.203 G 0.203 T 0.297 

MOTIF 1-AAACAAAT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 68 P= 8.5e-002
 0.861466 0.092184 0.009900 0.036450
 0.874715 0.015641 0.056077 0.053567
 0.917536 0.006690 0.074474 0.001300
 0.001300 0.996512 0.000888 0.001300
 0.962397 0.002246 0.031271 0.004086
 0.854248 0.006690 0.031222 0.107840
 0.846600 0.071990 0.013445 0.067965
 0.001300 0.041601 0.040088 0.917011

MOTIF 2-AGATAAGC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 35 P= 2.1e-001
 0.816845 0.035847 0.000845 0.146463
 0.001237 0.000845 0.996681 0.001237
 0.910406 0.058654 0.000845 0.030095
 0.033596 0.058654 0.000845 0.906906
 0.997074 0.000845 0.000845 0.001237
 0.910220 0.000845 0.000845 0.088091
 0.205550 0.000845 0.734559 0.059046
 0.146463 0.793739 0.029703 0.030095

MOTIF 3-ATCAATCA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 65 P= 3.3e-001
 0.996966 0.000876 0.000876 0.001282
 0.001282 0.000876 0.000876 0.996966
 0.001282 0.996560 0.000876 0.001282
 0.616334 0.155239 0.176829 0.051598
 0.854690 0.006598 0.121311 0.017401
 0.001282 0.000876 0.000876 0.996966
 0.001282 0.996560 0.000876 0.001282
 0.945422 0.000876 0.000876 0.052827

MOTIF 4-GATAACGC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 5.0e-001
 0.002490 0.001701 0.993319 0.002490
 0.877724 0.001701 0.118085 0.002490
 0.002490 0.118085 0.001701 0.877724
 0.760588 0.001701 0.235221 0.002490
 0.994108 0.001701 0.001701 0.002490
 0.002490 0.993319 0.001701 0.002490
 0.002490 0.001701 0.993319 0.002490
 0.294864 0.642846 0.001701 0.060589

MOTIF 5-ATCAATTA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 20 P= 5.0e-001
 0.936100 0.018445 0.018445 0.027009
 0.027009 0.018445 0.018445 0.936100
 0.027009 0.927536 0.018445 0.027009
 0.936100 0.018445 0.018445 0.027009
 0.936100 0.018445 0.018445 0.027009
 0.027009 0.018445 0.018445 0.936100
 0.027009 0.018445 0.018445 0.936100
 0.936100 0.018445 0.018445 0.027009

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/lab.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_lab/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n09.farnam.hpc.yale.internal
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FINALTIME:	1.65 seconds
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