********************************************************************************
STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
********************************************************************************
MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

********************************************************************************


********************************************************************************
REFERENCE
********************************************************************************
If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
********************************************************************************


ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.251 C 0.249 G 0.249 T 0.251 

MOTIF 1-ACTTCATC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 5.0e-001
 0.840166 0.002719 0.002719 0.154395
 0.002750 0.991781 0.002719 0.002750
 0.002750 0.002719 0.154364 0.840166
 0.002750 0.002719 0.079020 0.915511
 0.002750 0.840136 0.002719 0.154395
 0.764344 0.078542 0.154364 0.002750
 0.002750 0.078542 0.078542 0.840166
 0.002750 0.685599 0.078542 0.233109

MOTIF 2-AGGAGGCG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 1.0e+000
 0.931945 0.022600 0.022600 0.022855
 0.022855 0.022600 0.931691 0.022855
 0.022855 0.022600 0.931691 0.022855
 0.931945 0.022600 0.022600 0.022855
 0.022855 0.022600 0.931691 0.022855
 0.022855 0.022600 0.931691 0.022855
 0.022855 0.931691 0.022600 0.022855
 0.022855 0.022600 0.931691 0.022855

MOTIF 3-SATCGAAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 16 P= 1.0e+000
 0.002385 0.662432 0.332798 0.002385
 0.729872 0.002358 0.068115 0.199655
 0.266240 0.002358 0.002358 0.729043
 0.002385 0.992872 0.002358 0.002385
 0.002385 0.002358 0.992872 0.002385
 0.992898 0.002358 0.002358 0.002385
 0.861385 0.002358 0.068115 0.068142
 0.927142 0.002358 0.068115 0.002385

MOTIF 4-CACTGGAG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 1.0e+000
 0.078309 0.916240 0.002710 0.002741
 0.916271 0.078278 0.002710 0.002741
 0.002741 0.762223 0.232296 0.002741
 0.002741 0.002710 0.002710 0.991839
 0.154829 0.002710 0.839720 0.002741
 0.078309 0.002710 0.916240 0.002741
 0.916271 0.002710 0.002710 0.078309
 0.002741 0.078278 0.916240 0.002741

MOTIF 5-TCAATACA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 12 P= 1.0e+000
 0.097885 0.003388 0.003388 0.895340
 0.003426 0.799653 0.003388 0.193534
 0.989798 0.003388 0.003388 0.003426
 0.800286 0.192900 0.003388 0.003426
 0.003426 0.097847 0.003388 0.895340
 0.895340 0.097847 0.003388 0.003426
 0.003426 0.800843 0.003388 0.192343
 0.855935 0.137251 0.003388 0.003426

********************************************************************************
Stopped because maximum number of motifs (5) reached.
********************************************************************************
COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/h.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_h/ --w 8 --nmotifs 5 --verbosity 1
********************************************************************************
CPU:		c27n06.farnam.hpc.yale.internal
********************************************************************************
FINALTIME:	0.96 seconds
********************************************************************************