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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.361 C 0.139 G 0.139 T 0.361 

MOTIF 1-ACCATATA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 44 P= 1.2e-001
 0.996201 0.000828 0.000828 0.002144
 0.002144 0.837101 0.000828 0.159928
 0.002144 0.870908 0.124805 0.002144
 0.955008 0.042021 0.000828 0.002144
 0.002144 0.000828 0.083346 0.913682
 0.771850 0.017880 0.000828 0.209442
 0.090864 0.000828 0.000828 0.907480
 0.789971 0.083346 0.042021 0.084662

MOTIF 2-CAAAATGC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 3.0e-001
 0.002754 0.993429 0.001063 0.002754
 0.942202 0.053980 0.001063 0.002754
 0.836198 0.107068 0.053980 0.002754
 0.906116 0.001063 0.001063 0.091757
 0.942202 0.053980 0.001063 0.002754
 0.002754 0.053980 0.053980 0.889285
 0.002754 0.001063 0.993429 0.002754
 0.002754 0.673351 0.001063 0.322832

MOTIF 3-CTTAGAAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 79 P= 3.5e-001
 0.000810 0.998068 0.000313 0.000810
 0.274393 0.022316 0.000313 0.702978
 0.052107 0.131651 0.265112 0.551130
 0.780601 0.218277 0.000313 0.000810
 0.000810 0.000313 0.998068 0.000810
 0.773707 0.000313 0.218728 0.007252
 0.744048 0.000313 0.153453 0.102186
 0.571688 0.000313 0.277115 0.150885

MOTIF 4-CAAATGCG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 5.0e-001
 0.002739 0.835416 0.053684 0.108161
 0.889893 0.053684 0.001058 0.055365
 0.995146 0.001058 0.001058 0.002739
 0.942520 0.001058 0.053684 0.002739
 0.012804 0.001058 0.001058 0.985080
 0.107992 0.053684 0.730163 0.108161
 0.002739 0.993465 0.001058 0.002739
 0.267576 0.001058 0.559513 0.171854

MOTIF 5-ACTACAAG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 15 P= 1.0e+000
 0.914172 0.000824 0.000824 0.084179
 0.043157 0.890505 0.000824 0.065513
 0.043157 0.000824 0.017806 0.938212
 0.790577 0.000824 0.124288 0.084311
 0.013186 0.944770 0.017806 0.024238
 0.873150 0.041847 0.082869 0.002135
 0.873150 0.041847 0.000824 0.084179
 0.043157 0.000824 0.789000 0.167019

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/fd96Cb.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_fd96Cb/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n03.farnam.hpc.yale.internal
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FINALTIME:	1.58 seconds
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