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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.295 C 0.204 G 0.204 T 0.295 

MOTIF 1-AACGGTTA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 5.0e-001
 0.877779 0.001716 0.059871 0.060635
 0.935934 0.001716 0.059871 0.002479
 0.002479 0.876828 0.001716 0.118977
 0.002479 0.036984 0.958057 0.002479
 0.002479 0.001716 0.993326 0.002479
 0.002479 0.001716 0.059871 0.935934
 0.177791 0.025790 0.059871 0.736548
 0.702563 0.176744 0.118213 0.002479

MOTIF 2-CCGCCSAC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 33 P= 8.8e-001
 0.035192 0.962374 0.000996 0.001439
 0.001439 0.846980 0.000996 0.150585
 0.285650 0.000996 0.711915 0.001439
 0.039286 0.890666 0.000996 0.069053
 0.001439 0.979250 0.000996 0.018315
 0.001439 0.491061 0.289355 0.218145
 0.644636 0.203838 0.034748 0.116778
 0.001439 0.928403 0.068719 0.001439

MOTIF 3-GGCAAACC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 30 P= 1.0e+000
 0.079976 0.000866 0.859105 0.060053
 0.042756 0.059668 0.896325 0.001251
 0.042756 0.854914 0.088927 0.013403
 0.815281 0.059573 0.030220 0.094926
 0.779296 0.030220 0.030220 0.160265
 0.815186 0.006480 0.089021 0.089312
 0.030605 0.951462 0.016682 0.001251
 0.208732 0.695476 0.035834 0.059958

MOTIF 4-GTCAACAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 18 P= 1.0e+000
 0.002462 0.001704 0.993372 0.002462
 0.002462 0.001704 0.001704 0.994130
 0.002462 0.993372 0.001704 0.002462
 0.994130 0.001704 0.001704 0.002462
 0.878432 0.117401 0.001704 0.002462
 0.002462 0.761228 0.001704 0.234605
 0.936374 0.059460 0.001704 0.002462
 0.994130 0.001704 0.001704 0.002462

MOTIF 5-CGATAGCT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 15 P= 1.0e+000
 0.002330 0.939064 0.001613 0.056992
 0.002330 0.001613 0.993727 0.002330
 0.994444 0.001613 0.001613 0.002330
 0.002330 0.001613 0.001613 0.994444
 0.994444 0.001613 0.001613 0.002330
 0.166845 0.056275 0.774549 0.002330
 0.056992 0.824725 0.001613 0.116670
 0.002330 0.276694 0.111289 0.609687

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/eyg.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_eyg/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n07.farnam.hpc.yale.internal
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FINALTIME:	1.68 seconds
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