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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.336 C 0.165 G 0.165 T 0.336 

MOTIF 1-AATGCATT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 15 P= 2.4e-001
 0.994058 0.001471 0.001471 0.003000
 0.994058 0.001471 0.001471 0.003000
 0.003000 0.076288 0.001471 0.919241
 0.003000 0.001471 0.992528 0.003000
 0.003000 0.992528 0.001471 0.003000
 0.919241 0.001471 0.076288 0.003000
 0.003000 0.001471 0.001471 0.994058
 0.003000 0.001471 0.001471 0.994058

MOTIF 2-AACACTTT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 123 P= 2.8e-001
 0.760944 0.092409 0.066409 0.080239
 0.812840 0.041165 0.026031 0.119965
 0.007718 0.915023 0.022297 0.054962
 0.761529 0.088095 0.066864 0.083512
 0.004505 0.907194 0.005849 0.082452
 0.092557 0.052721 0.093828 0.760894
 0.034349 0.027745 0.069646 0.868260
 0.103025 0.073370 0.122835 0.700769

MOTIF 3-TATWTGAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 40 P= 5.0e-001
 0.002369 0.001162 0.001162 0.995307
 0.995307 0.001162 0.001162 0.002369
 0.002369 0.001162 0.001162 0.995307
 0.431079 0.001162 0.001162 0.566597
 0.002369 0.001162 0.001162 0.995307
 0.002369 0.001162 0.994099 0.002369
 0.729187 0.001162 0.001162 0.268490
 0.782288 0.027538 0.001162 0.189012

MOTIF 4-ACTAAATA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 15 P= 1.0e+000
 0.939591 0.014955 0.014955 0.030500
 0.030500 0.924045 0.014955 0.030500
 0.030500 0.014955 0.014955 0.939591
 0.939591 0.014955 0.014955 0.030500
 0.939591 0.014955 0.014955 0.030500
 0.939591 0.014955 0.014955 0.030500
 0.030500 0.014955 0.014955 0.939591
 0.939591 0.014955 0.014955 0.030500

MOTIF 5-AAAGAAAC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 11 P= 1.0e+000
 0.939591 0.014955 0.014955 0.030500
 0.939591 0.014955 0.014955 0.030500
 0.939591 0.014955 0.014955 0.030500
 0.030500 0.014955 0.924045 0.030500
 0.939591 0.014955 0.014955 0.030500
 0.939591 0.014955 0.014955 0.030500
 0.939591 0.014955 0.014955 0.030500
 0.030500 0.924045 0.014955 0.030500

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/ey.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_ey/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n12.farnam.hpc.yale.internal
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FINALTIME:	1.62 seconds
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