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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.352 C 0.148 G 0.148 T 0.352 

MOTIF 1-TACACAAT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 7.0e-001
 0.073034 0.000899 0.000899 0.925168
 0.978612 0.018347 0.000899 0.002142
 0.002142 0.952669 0.043048 0.002142
 0.894314 0.043048 0.043048 0.019590
 0.002142 0.994818 0.000899 0.002142
 0.953912 0.000899 0.000899 0.044291
 0.530239 0.127754 0.127754 0.214253
 0.002142 0.127754 0.000899 0.869205

MOTIF 2-CAGTGCAT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 25 P= 7.6e-001
 0.002763 0.993313 0.001160 0.002763
 0.777020 0.001160 0.110108 0.111712
 0.002763 0.001160 0.993313 0.002763
 0.221365 0.001160 0.001160 0.776315
 0.057150 0.001160 0.938926 0.002763
 0.002763 0.993313 0.001160 0.002763
 0.886143 0.001160 0.055547 0.057150
 0.057150 0.110108 0.055547 0.777195

MOTIF 3-GAGTTCAT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 16 P= 7.6e-001
 0.003481 0.001461 0.991577 0.003481
 0.925091 0.069968 0.001461 0.003481
 0.003481 0.001461 0.991577 0.003481
 0.140715 0.001461 0.069968 0.787856
 0.071988 0.001461 0.001461 0.925091
 0.003481 0.991577 0.001461 0.003481
 0.896731 0.069968 0.001461 0.031841
 0.140715 0.001461 0.069968 0.787856

MOTIF 4-ATATTTCA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 50 P= 8.6e-001
 0.786701 0.023547 0.104813 0.084939
 0.001507 0.000632 0.000632 0.997228
 0.878291 0.030295 0.089907 0.001507
 0.020743 0.016615 0.000632 0.962010
 0.001664 0.016615 0.035004 0.946717
 0.050704 0.050523 0.050523 0.848250
 0.001507 0.996353 0.000632 0.001507
 0.742333 0.012604 0.210296 0.034768

MOTIF 5-CAACAATG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 33 P= 8.8e-001
 0.002321 0.990191 0.000974 0.006514
 0.904391 0.000974 0.046644 0.047991
 0.793851 0.092461 0.019880 0.093808
 0.002321 0.929809 0.046644 0.021227
 0.950061 0.000974 0.046644 0.002321
 0.858574 0.046644 0.092461 0.002321
 0.047991 0.046644 0.000974 0.904391
 0.047991 0.046644 0.774587 0.130778

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/esn.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_esn/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n01.farnam.hpc.yale.internal
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FINALTIME:	2.27 seconds
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