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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.308 C 0.192 G 0.192 T 0.308 

MOTIF 1-AGTGTTGC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 56 P= 3.3e-001
 0.858770 0.087699 0.035312 0.018218
 0.000775 0.017897 0.951261 0.030067
 0.245294 0.044020 0.077409 0.633276
 0.000775 0.070199 0.928251 0.000775
 0.088190 0.073862 0.035312 0.802636
 0.208796 0.035312 0.042728 0.713163
 0.053077 0.026605 0.919543 0.000775
 0.087908 0.665918 0.192983 0.053190

MOTIF 2-YATCGATR STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 24 P= 5.0e-001
 0.001771 0.632991 0.040901 0.324337
 0.996029 0.001100 0.001100 0.001771
 0.041635 0.040901 0.001100 0.916364
 0.029909 0.939082 0.029238 0.001771
 0.001771 0.029238 0.939082 0.029909
 0.916364 0.001100 0.040901 0.041635
 0.001771 0.001100 0.001100 0.996029
 0.324337 0.040901 0.632991 0.001771

MOTIF 3-AAATACCG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 29 P= 7.0e-001
 0.958555 0.001042 0.038727 0.001677
 0.996240 0.001042 0.001042 0.001677
 0.996240 0.001042 0.001042 0.001677
 0.001677 0.016642 0.038727 0.942954
 0.857485 0.038727 0.064426 0.039362
 0.021982 0.824011 0.038727 0.115280
 0.021982 0.911915 0.001042 0.065061
 0.077290 0.114462 0.790971 0.017277

MOTIF 4-TTAAATGT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 69 P= 9.1e-001
 0.098181 0.035489 0.077919 0.788412
 0.061392 0.035489 0.095799 0.807321
 0.898465 0.007279 0.087997 0.006260
 0.830820 0.058884 0.072255 0.038040
 0.943207 0.003825 0.025192 0.027776
 0.088717 0.007717 0.040564 0.863002
 0.042445 0.038120 0.876625 0.042810
 0.183088 0.004009 0.000483 0.812420

MOTIF 5-GAACAGCT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 52 P= 9.5e-001
 0.003864 0.004079 0.981443 0.010614
 0.802591 0.070320 0.070171 0.056919
 0.756510 0.116475 0.000640 0.126375
 0.099316 0.829558 0.046944 0.024182
 0.816382 0.023792 0.093248 0.066577
 0.047334 0.000640 0.895107 0.056919
 0.024182 0.779123 0.102833 0.093862
 0.093713 0.033376 0.070096 0.802814

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/ems.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_ems/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c17n10.farnam.hpc.yale.internal
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FINALTIME:	1.91 seconds
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