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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.297 C 0.203 G 0.203 T 0.297 

MOTIF 1-GGTAAACA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 59 P= 1.4e-001
 0.018067 0.000507 0.767946 0.213480
 0.052720 0.000507 0.946032 0.000741
 0.010062 0.046956 0.165485 0.777497
 0.816360 0.104298 0.000507 0.078836
 0.785737 0.140457 0.000507 0.073299
 0.771378 0.035104 0.095648 0.097870
 0.029674 0.825700 0.092700 0.051926
 0.821663 0.017805 0.152630 0.007902

MOTIF 2-AGKGCTGM STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 40 P= 5.0e-001
 0.997458 0.000734 0.000734 0.001074
 0.001074 0.050942 0.946911 0.001074
 0.001074 0.000734 0.618604 0.379588
 0.001074 0.000734 0.997118 0.001074
 0.001074 0.709581 0.050862 0.238484
 0.001074 0.000734 0.000734 0.997458
 0.001074 0.000734 0.946991 0.051201
 0.338535 0.634594 0.025798 0.001074

MOTIF 3-CATCGATA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 36 P= 5.0e-001
 0.083422 0.622780 0.000935 0.292863
 0.983549 0.014148 0.000935 0.001367
 0.065306 0.032853 0.000935 0.900906
 0.033285 0.964412 0.000935 0.001367
 0.001367 0.000935 0.996330 0.001367
 0.964844 0.000935 0.000935 0.033285
 0.014580 0.000935 0.032853 0.951631
 0.833468 0.018133 0.064977 0.083422

MOTIF 4-GAAAACAG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 48 P= 7.0e-001
 0.082806 0.000983 0.914774 0.001437
 0.760984 0.236596 0.000983 0.001437
 0.747405 0.000983 0.216632 0.034980
 0.963054 0.000983 0.000983 0.034980
 0.929404 0.000983 0.000983 0.068631
 0.080059 0.917521 0.000983 0.001437
 0.713591 0.000983 0.169076 0.116349
 0.001437 0.101936 0.895190 0.001437

MOTIF 5-ACATACTA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 32 P= 1.0e+000
 0.953670 0.044125 0.000896 0.001310
 0.001310 0.738853 0.258528 0.001310
 0.647352 0.000896 0.215299 0.136453
 0.001310 0.000896 0.000896 0.996899
 0.690482 0.000896 0.000896 0.307726
 0.001310 0.996485 0.000896 0.001310
 0.001310 0.000896 0.245970 0.751825
 0.669929 0.215299 0.000896 0.113877

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/emc.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_emc/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n07.farnam.hpc.yale.internal
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FINALTIME:	1.99 seconds
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