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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.256 C 0.244 G 0.244 T 0.256 

MOTIF 1-ACCGGTTT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 32 P= 3.0e-001
 0.920573 0.001056 0.017219 0.061153
 0.031106 0.936732 0.001056 0.031106
 0.073523 0.805035 0.073470 0.047973
 0.151582 0.001056 0.725875 0.121487
 0.061201 0.001056 0.936635 0.001108
 0.006846 0.061100 0.121338 0.810716
 0.073523 0.001056 0.031102 0.894320
 0.181241 0.031054 0.061440 0.726265

MOTIF 2-AGAAAGAG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 72 P= 5.0e-001
 0.812186 0.079423 0.071779 0.036612
 0.001018 0.065530 0.923253 0.010199
 0.895213 0.050374 0.046652 0.007761
 0.941705 0.042536 0.000969 0.014790
 0.910901 0.025192 0.007712 0.056194
 0.001018 0.047297 0.939266 0.012420
 0.879907 0.000969 0.071779 0.047345
 0.001018 0.003498 0.939290 0.056194

MOTIF 3-CAKTCRCW STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 31 P= 7.0e-001
 0.001152 0.996600 0.001097 0.001152
 0.996654 0.001097 0.001097 0.001152
 0.001152 0.001097 0.638964 0.358788
 0.001152 0.001097 0.001097 0.996654
 0.063497 0.934254 0.001097 0.001152
 0.326993 0.032270 0.639586 0.001152
 0.001152 0.640042 0.264036 0.094770
 0.589849 0.001097 0.001097 0.407957

MOTIF 4-TTWGATAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 29 P= 7.6e-001
 0.089849 0.045662 0.134023 0.730465
 0.108632 0.001552 0.001552 0.888263
 0.595988 0.001552 0.001552 0.400908
 0.001630 0.001552 0.995188 0.001630
 0.774717 0.133882 0.089772 0.001630
 0.001630 0.001552 0.001552 0.995266
 0.995266 0.001552 0.001552 0.001630
 0.995266 0.001552 0.001552 0.001630

MOTIF 5-CCCAAAAA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 17 P= 1.0e+000
 0.001923 0.994323 0.001831 0.001923
 0.001923 0.994323 0.001831 0.001923
 0.001923 0.994323 0.001831 0.001923
 0.994414 0.001831 0.001831 0.001923
 0.966372 0.001831 0.001831 0.029966
 0.784883 0.001831 0.211363 0.001923
 0.920823 0.053877 0.001831 0.023468
 0.680964 0.106090 0.001831 0.211115

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/dl.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_dl/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n03.farnam.hpc.yale.internal
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FINALTIME:	1.92 seconds
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