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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.328 C 0.172 G 0.172 T 0.328 

MOTIF 1-AAAAGGGG STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 36 P= 2.4e-001
 0.928516 0.034935 0.000844 0.035706
 0.894315 0.000844 0.103226 0.001615
 0.996697 0.000844 0.000844 0.001615
 0.841755 0.103116 0.000844 0.054285
 0.001615 0.000844 0.995926 0.001615
 0.035706 0.083542 0.879137 0.001615
 0.035706 0.034935 0.688339 0.241021
 0.075039 0.000844 0.785809 0.138308

MOTIF 2-AGACCTWG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 27 P= 3.3e-001
 0.978034 0.001065 0.001065 0.019837
 0.117428 0.130200 0.707335 0.045036
 0.780700 0.044064 0.130200 0.045036
 0.131242 0.865656 0.001065 0.002037
 0.002037 0.994861 0.001065 0.002037
 0.088036 0.001065 0.087201 0.823699
 0.346307 0.001065 0.087063 0.565565
 0.045036 0.001065 0.865864 0.088036

MOTIF 3-AAAATATA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 57 P= 5.0e-001
 0.811473 0.000796 0.007224 0.180508
 0.957246 0.000796 0.011217 0.030741
 0.831448 0.076130 0.076130 0.016292
 0.933360 0.010879 0.011604 0.044157
 0.001523 0.000796 0.026040 0.971641
 0.699094 0.097683 0.201700 0.001523
 0.001523 0.000796 0.003747 0.993935
 0.996886 0.000796 0.000796 0.001523

MOTIF 4-CAGTGCAC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 22 P= 5.0e-001
 0.002573 0.993510 0.001344 0.002573
 0.668303 0.109952 0.055736 0.166010
 0.002573 0.001344 0.993510 0.002573
 0.111181 0.011731 0.001344 0.875744
 0.002573 0.001344 0.993510 0.002573
 0.002573 0.720938 0.055648 0.220841
 0.994738 0.001344 0.001344 0.002573
 0.002573 0.993510 0.001344 0.002573

MOTIF 5-AAAATGTT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 16 P= 1.0e+000
 0.938945 0.015600 0.015600 0.029855
 0.938945 0.015600 0.015600 0.029855
 0.938945 0.015600 0.015600 0.029855
 0.938945 0.015600 0.015600 0.029855
 0.029855 0.015600 0.015600 0.938945
 0.029855 0.015600 0.924691 0.029855
 0.029855 0.015600 0.015600 0.938945
 0.029855 0.015600 0.015600 0.938945

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/dac.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_dac/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n10.farnam.hpc.yale.internal
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FINALTIME:	1.61 seconds
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