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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.343 C 0.157 G 0.157 T 0.343 

MOTIF 1-AWAAATAT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 73 P= 1.4e-001
 0.772600 0.001199 0.001199 0.225002
 0.537483 0.067749 0.059348 0.335420
 0.994984 0.001199 0.001199 0.002619
 0.994984 0.001199 0.001199 0.002619
 0.994984 0.001199 0.001199 0.002619
 0.002619 0.001199 0.001199 0.994984
 0.994984 0.001199 0.001199 0.002619
 0.002619 0.001199 0.001199 0.994984

MOTIF 2-CAATTAAA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 28 P= 3.0e-001
 0.001629 0.995996 0.000746 0.001629
 0.831619 0.000746 0.133081 0.034554
 0.908211 0.000746 0.080614 0.010429
 0.001629 0.010527 0.099837 0.888007
 0.001629 0.003769 0.000746 0.993856
 0.767035 0.033670 0.138485 0.060809
 0.910064 0.051613 0.033670 0.004653
 0.883262 0.071657 0.033670 0.011410

MOTIF 3-GCTTARTT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 28 P= 7.6e-001
 0.002674 0.001224 0.993427 0.002674
 0.002674 0.993427 0.001224 0.002674
 0.002674 0.055266 0.109309 0.832751
 0.002674 0.001224 0.001224 0.994878
 0.994878 0.001224 0.001224 0.002674
 0.485603 0.109309 0.402414 0.002674
 0.025046 0.131680 0.271958 0.571316
 0.056716 0.001224 0.001224 0.940835

MOTIF 4-AGTACWAM STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 35 P= 8.3e-001
 0.965044 0.032653 0.000723 0.001580
 0.001580 0.000723 0.996117 0.001580
 0.129505 0.000723 0.077801 0.791971
 0.870453 0.096822 0.000723 0.032002
 0.001580 0.996117 0.000723 0.001580
 0.537215 0.000723 0.000723 0.461338
 0.625066 0.118287 0.000723 0.255923
 0.579005 0.301722 0.100489 0.018784

MOTIF 5-CACTGAAA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 15 P= 1.0e+000
 0.004054 0.990036 0.001856 0.004054
 0.992234 0.001856 0.001856 0.004054
 0.004054 0.990036 0.001856 0.004054
 0.004054 0.001856 0.083784 0.910306
 0.004054 0.001856 0.990036 0.004054
 0.992234 0.001856 0.001856 0.004054
 0.581539 0.001856 0.248432 0.168174
 0.992234 0.001856 0.001856 0.004054

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/cato.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_cato/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n12.farnam.hpc.yale.internal
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FINALTIME:	1.72 seconds
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