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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.288 C 0.212 G 0.212 T 0.288 

MOTIF 1-GTAAATAA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 38 P= 5.5e-002
 0.001466 0.001078 0.995989 0.001466
 0.001466 0.001078 0.001078 0.996377
 0.818806 0.036352 0.143376 0.001466
 0.996377 0.001078 0.001078 0.001466
 0.925717 0.001078 0.001078 0.072126
 0.001466 0.144332 0.001078 0.853123
 0.819556 0.001078 0.107240 0.072126
 0.819096 0.143086 0.036352 0.001466

MOTIF 2-AGKTGGGC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 5.0e-001
 0.994017 0.001781 0.001781 0.002421
 0.002421 0.001781 0.993377 0.002421
 0.119112 0.118472 0.293604 0.468812
 0.118925 0.001781 0.118472 0.760822
 0.002421 0.001781 0.993377 0.002421
 0.119112 0.001781 0.876686 0.002421
 0.002421 0.118285 0.818621 0.060673
 0.002421 0.993377 0.001781 0.002421

MOTIF 3-AGTGCACT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 47 P= 6.7e-001
 0.757744 0.096958 0.144158 0.001141
 0.205416 0.055840 0.682335 0.056409
 0.048097 0.000839 0.076921 0.874143
 0.078201 0.014567 0.886680 0.020552
 0.020552 0.886680 0.014567 0.078201
 0.874143 0.076921 0.000839 0.048097
 0.056409 0.682335 0.055840 0.205416
 0.001141 0.144158 0.096958 0.757744

MOTIF 4-ACAAATAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 34 P= 8.8e-001
 0.898380 0.082293 0.000967 0.018360
 0.001315 0.943936 0.000967 0.053782
 0.980750 0.003872 0.000967 0.014410
 0.924397 0.054175 0.014063 0.007366
 0.955718 0.010365 0.000967 0.032949
 0.001315 0.000967 0.000967 0.996751
 0.761060 0.160090 0.014063 0.064788
 0.838238 0.045662 0.014063 0.102036

MOTIF 5-ACCCAATG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 12 P= 1.0e+000
 0.837880 0.156567 0.002353 0.003200
 0.035068 0.882396 0.002353 0.080183
 0.003200 0.991247 0.002353 0.003200
 0.157413 0.837034 0.002353 0.003200
 0.992093 0.002353 0.002353 0.003200
 0.883119 0.034222 0.002353 0.080306
 0.003200 0.002353 0.002353 0.992093
 0.080183 0.079336 0.760299 0.080183

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/btn.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_btn/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n02.farnam.hpc.yale.internal
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FINALTIME:	1.73 seconds
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