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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.351 C 0.149 G 0.149 T 0.351 

MOTIF 1-AGKGTATB STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 34 P= 2.4e-001
 0.963857 0.033759 0.000712 0.001672
 0.001672 0.000712 0.995944 0.001672
 0.001672 0.000712 0.624519 0.373097
 0.001672 0.000712 0.995944 0.001672
 0.001672 0.033759 0.000712 0.963857
 0.784517 0.000712 0.000712 0.214060
 0.001672 0.279086 0.000712 0.718530
 0.081552 0.332357 0.232787 0.353303

MOTIF 2-GCACGGCA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 64 P= 2.5e-001
 0.001104 0.118590 0.879202 0.001104
 0.184782 0.813644 0.000470 0.001104
 0.932503 0.000470 0.065923 0.001104
 0.184747 0.621004 0.087741 0.106508
 0.146390 0.044105 0.598790 0.210715
 0.044739 0.118590 0.770079 0.066592
 0.097406 0.783992 0.058984 0.059618
 0.857983 0.000470 0.031355 0.110192

MOTIF 3-ACTACATT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 31 P= 5.0e-001
 0.922908 0.017457 0.017457 0.042178
 0.002028 0.995080 0.000863 0.002028
 0.069449 0.040948 0.040948 0.848654
 0.795562 0.040948 0.081162 0.082327
 0.002028 0.973482 0.022462 0.002028
 0.951298 0.000863 0.000863 0.046975
 0.130841 0.008530 0.081162 0.779466
 0.130841 0.081162 0.040948 0.747048

MOTIF 4-AAATGCAT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 30 P= 8.8e-001
 0.914202 0.000880 0.082851 0.002067
 0.649127 0.000880 0.205942 0.144051
 0.791178 0.082719 0.000880 0.125223
 0.002067 0.041734 0.053674 0.902525
 0.002067 0.000880 0.994986 0.002067
 0.002067 0.994986 0.000880 0.002067
 0.832362 0.164691 0.000880 0.002067
 0.002067 0.000880 0.000880 0.996173

MOTIF 5-ACTGAGAG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 13 P= 1.0e+000
 0.940973 0.013573 0.013573 0.031882
 0.031882 0.922664 0.013573 0.031882
 0.031882 0.013573 0.013573 0.940973
 0.031882 0.013573 0.922664 0.031882
 0.940973 0.013573 0.013573 0.031882
 0.031882 0.013573 0.922664 0.031882
 0.940973 0.013573 0.013573 0.031882
 0.031882 0.013573 0.922664 0.031882

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/acj6.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_acj6/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n07.farnam.hpc.yale.internal
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FINALTIME:	1.54 seconds
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