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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.261 C 0.239 G 0.239 T 0.261 

MOTIF 1-CASCTGCY STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 168 P= 8.1e-007
 0.000397 0.998841 0.000364 0.000397
 0.987035 0.000364 0.012203 0.000397
 0.018155 0.331000 0.597641 0.053204
 0.000397 0.998841 0.000364 0.000397
 0.000397 0.000364 0.005643 0.993595
 0.016234 0.000364 0.983004 0.000397
 0.000397 0.833354 0.062190 0.104059
 0.193706 0.352662 0.021504 0.432128

MOTIF 2-AAGGTGAT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 27 P= 3.0e-001
 0.915730 0.001378 0.001378 0.081514
 0.882789 0.114329 0.001378 0.001503
 0.081643 0.001378 0.915476 0.001503
 0.001503 0.282260 0.618318 0.097920
 0.001503 0.001378 0.298016 0.699103
 0.121713 0.041320 0.795524 0.041444
 0.995741 0.001378 0.001378 0.001503
 0.001503 0.001378 0.001378 0.995741

MOTIF 3-TASCCACT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 25 P= 3.0e-001
 0.001922 0.001763 0.001763 0.994553
 0.994553 0.001763 0.001763 0.001922
 0.104244 0.461801 0.380954 0.053001
 0.001922 0.994394 0.001763 0.001922
 0.125389 0.870927 0.001763 0.001922
 0.943474 0.001763 0.052842 0.001922
 0.001922 0.790078 0.103920 0.104080
 0.001922 0.103920 0.103920 0.790237

MOTIF 4-ATAWWTAT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 36 P= 5.0e-001
 0.865245 0.001399 0.001399 0.131957
 0.001525 0.001399 0.001399 0.995678
 0.873629 0.001399 0.001399 0.123574
 0.457742 0.021664 0.041994 0.478600
 0.478600 0.041994 0.021664 0.457742
 0.123574 0.001399 0.001399 0.873629
 0.995678 0.001399 0.001399 0.001525
 0.131957 0.001399 0.001399 0.865245

MOTIF 5-CGACTGGG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 20 P= 5.0e-001
 0.055815 0.832550 0.109611 0.002024
 0.132047 0.001856 0.864073 0.002024
 0.994264 0.001856 0.001856 0.002024
 0.109779 0.886341 0.001856 0.002024
 0.002024 0.055647 0.001856 0.940472
 0.217534 0.001856 0.724794 0.055815
 0.055815 0.001856 0.832550 0.109779
 0.002024 0.163750 0.832202 0.002024

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/ac.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_ac/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n06.farnam.hpc.yale.internal
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FINALTIME:	2.16 seconds
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