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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.288 C 0.212 G 0.212 T 0.288 

MOTIF 1-CTATCGAY STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 27 P= 5.0e-001
 0.001568 0.995714 0.001150 0.001568
 0.149698 0.076510 0.001150 0.772642
 0.996132 0.001150 0.001150 0.001568
 0.017166 0.001150 0.189791 0.791893
 0.001568 0.958035 0.001150 0.039247
 0.001568 0.001150 0.958035 0.039247
 0.656165 0.001150 0.303437 0.039247
 0.001568 0.620715 0.001150 0.376567

MOTIF 2-AGTACATA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 25 P= 5.0e-001
 0.768022 0.085287 0.043216 0.103475
 0.001745 0.023876 0.930698 0.043681
 0.043681 0.001280 0.001280 0.953759
 0.911688 0.085287 0.001280 0.001745
 0.001745 0.953294 0.001280 0.043681
 0.925160 0.001280 0.001280 0.072279
 0.001745 0.001280 0.043216 0.953759
 0.785338 0.001280 0.085423 0.127959

MOTIF 3-AGAGSGAG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 5.0e-001
 0.993006 0.002080 0.002080 0.002835
 0.002835 0.002080 0.992251 0.002835
 0.993006 0.002080 0.002080 0.002835
 0.002835 0.020433 0.837648 0.139085
 0.158860 0.475926 0.362379 0.002835
 0.002835 0.002080 0.992251 0.002835
 0.993006 0.002080 0.002080 0.002835
 0.002835 0.002080 0.992251 0.002835

MOTIF 4-GTGGAAAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 40 P= 7.0e-001
 0.001276 0.087213 0.910234 0.001276
 0.001276 0.000936 0.062383 0.935405
 0.001276 0.165152 0.677682 0.155890
 0.001276 0.000936 0.996511 0.001276
 0.853139 0.000936 0.052528 0.093396
 0.966177 0.031610 0.000936 0.001276
 0.935405 0.062383 0.000936 0.001276
 0.766204 0.216246 0.016273 0.001276

MOTIF 5-CACTGAGA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 24 P= 1.0e+000
 0.041436 0.819972 0.017655 0.120937
 0.995922 0.001213 0.001213 0.001653
 0.001653 0.995482 0.001213 0.001653
 0.124619 0.001213 0.001213 0.872956
 0.041372 0.001213 0.939321 0.018095
 0.876638 0.001213 0.120497 0.001653
 0.001653 0.001213 0.699593 0.297542
 0.916484 0.001213 0.040932 0.041372

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/ab.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_ab/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n09.farnam.hpc.yale.internal
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FINALTIME:	1.67 seconds
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