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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.305 C 0.195 G 0.195 T 0.305 

MOTIF 1-TCWCGCTC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 3.0e-001
 0.002990 0.001913 0.001913 0.993184
 0.002990 0.924143 0.001913 0.070955
 0.547148 0.116227 0.001913 0.334712
 0.070955 0.924143 0.001913 0.002990
 0.002990 0.001913 0.992108 0.002990
 0.139139 0.720028 0.069878 0.070955
 0.002990 0.001913 0.001913 0.993184
 0.002990 0.992108 0.001913 0.002990

MOTIF 2-AAGAAAGC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 27 P= 5.0e-001
 0.995248 0.001334 0.001334 0.002084
 0.868158 0.001334 0.048721 0.081787
 0.002084 0.001334 0.994497 0.002084
 0.710008 0.143954 0.001334 0.144705
 0.842969 0.001334 0.153613 0.002084
 0.995248 0.001334 0.001334 0.002084
 0.002084 0.143954 0.851877 0.002084
 0.002084 0.947034 0.048797 0.002084

MOTIF 3-ATAAATAM STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 60 P= 7.9e-001
 0.882939 0.000667 0.115351 0.001043
 0.001043 0.000667 0.000667 0.997623
 0.973922 0.000667 0.000667 0.024743
 0.846807 0.138713 0.013437 0.001043
 0.926444 0.000667 0.024368 0.048521
 0.001043 0.119516 0.000667 0.878774
 0.804066 0.143178 0.000667 0.052089
 0.352501 0.645789 0.000667 0.001043

MOTIF 4-ACGCACAT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 47 P= 8.3e-001
 0.846149 0.076161 0.038548 0.039142
 0.017170 0.905141 0.038548 0.039142
 0.100762 0.038548 0.843520 0.017170
 0.039142 0.905141 0.001055 0.054662
 0.921255 0.076040 0.001055 0.001649
 0.017170 0.867527 0.076161 0.039142
 0.883400 0.001055 0.001055 0.114489
 0.001649 0.170906 0.001055 0.826390

MOTIF 5-WAATGGCC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 17 P= 1.0e+000
 0.569405 0.001984 0.072458 0.356153
 0.781055 0.001984 0.213861 0.003100
 0.992933 0.001984 0.001984 0.003100
 0.003100 0.001984 0.001984 0.992933
 0.003100 0.001984 0.991816 0.003100
 0.214750 0.001984 0.780166 0.003100
 0.003100 0.991816 0.001984 0.003100
 0.003100 0.991816 0.001984 0.003100

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Stat92E.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Stat92E/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n07.farnam.hpc.yale.internal
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FINALTIME:	1.57 seconds
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