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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.291 C 0.209 G 0.209 T 0.291 

MOTIF 1-CATTTGTA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 43 P= 3.3e-001
 0.094491 0.902747 0.001155 0.001607
 0.816443 0.065556 0.001155 0.116847
 0.039897 0.001155 0.001155 0.957794
 0.001607 0.001155 0.039444 0.957794
 0.039897 0.001155 0.039444 0.919504
 0.044542 0.155055 0.798796 0.001607
 0.001607 0.065556 0.039444 0.893393
 0.919504 0.039444 0.001155 0.039897

MOTIF 2-TAAACAAA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 45 P= 8.8e-001
 0.001338 0.000961 0.000961 0.996740
 0.942534 0.008764 0.037895 0.010807
 0.974076 0.000961 0.014156 0.010807
 0.838248 0.032886 0.050206 0.078659
 0.001338 0.804216 0.000961 0.193484
 0.964814 0.000961 0.032886 0.001338
 0.906080 0.036701 0.055881 0.001338
 0.791614 0.078282 0.032835 0.097269

MOTIF 3-AACAGCTG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 9.5e-001
 0.783377 0.001585 0.160276 0.054763
 0.742779 0.212830 0.001585 0.042806
 0.002206 0.994002 0.001585 0.002206
 0.836785 0.106867 0.054141 0.002206
 0.002206 0.001585 0.994002 0.002206
 0.002206 0.994002 0.001585 0.002206
 0.002206 0.001585 0.001585 0.994624
 0.002206 0.001585 0.994002 0.002206

MOTIF 4-ATGCATAT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 20 P= 1.0e+000
 0.936813 0.000988 0.017365 0.044835
 0.017752 0.000988 0.033742 0.947518
 0.133027 0.038941 0.826657 0.001375
 0.060967 0.873517 0.000988 0.064528
 0.865422 0.066601 0.000988 0.066989
 0.001375 0.132640 0.000988 0.864998
 0.862416 0.000988 0.066707 0.069889
 0.067095 0.066601 0.033742 0.832562

MOTIF 5-AATATACC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 1.0e+000
 0.940969 0.001174 0.040106 0.017751
 0.879095 0.079164 0.040106 0.001634
 0.158693 0.017291 0.001174 0.822842
 0.901911 0.017291 0.001174 0.079625
 0.040567 0.001174 0.001174 0.957085
 0.921502 0.040106 0.017291 0.021101
 0.022612 0.818474 0.040106 0.118808
 0.046747 0.926881 0.008620 0.017751

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Side.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Side/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n07.farnam.hpc.yale.internal
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FINALTIME:	1.96 seconds
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