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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.291 C 0.209 G 0.209 T 0.291 

MOTIF 1-CATCGACT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 22 P= 2.4e-001
 0.002146 0.943109 0.052599 0.002146
 0.892655 0.001537 0.052599 0.053208
 0.053208 0.052599 0.052764 0.841428
 0.002146 0.943109 0.001537 0.053208
 0.002146 0.001537 0.994171 0.002146
 0.738975 0.052599 0.155217 0.053208
 0.053208 0.687140 0.155217 0.104434
 0.023284 0.001537 0.001537 0.973641

MOTIF 2-AAACCTGT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 2.4e-001
 0.952548 0.001296 0.044346 0.001809
 0.891677 0.019118 0.044346 0.044859
 0.952548 0.001296 0.001296 0.044859
 0.001809 0.995085 0.001296 0.001809
 0.001809 0.995085 0.001296 0.001809
 0.094530 0.087535 0.174331 0.643604
 0.044859 0.001296 0.952035 0.001809
 0.106241 0.001296 0.001296 0.891166

MOTIF 3-AACTGAAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 48 P= 2.5e-001
 0.995932 0.001198 0.001198 0.001672
 0.995932 0.001198 0.001198 0.001672
 0.001672 0.995458 0.001198 0.001672
 0.192631 0.148990 0.001198 0.657182
 0.001672 0.217116 0.779540 0.001672
 0.995932 0.001198 0.001198 0.001672
 0.796741 0.001198 0.040985 0.161076
 0.819865 0.001198 0.041049 0.137888

MOTIF 4-CAGCCGAG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 18 P= 9.5e-001
 0.003193 0.839149 0.002287 0.155371
 0.916266 0.078254 0.002287 0.003193
 0.003193 0.002287 0.991328 0.003193
 0.155371 0.610513 0.002287 0.231829
 0.003193 0.839149 0.154466 0.003193
 0.003193 0.002287 0.915360 0.079160
 0.916266 0.002287 0.002287 0.079160
 0.003193 0.002287 0.991328 0.003193

MOTIF 5-CTGCTGCA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 40 P= 9.9e-001
 0.040317 0.956892 0.001165 0.001626
 0.001626 0.001165 0.039856 0.957353
 0.001626 0.001165 0.995583 0.001626
 0.001626 0.691838 0.001165 0.305371
 0.001626 0.001165 0.001165 0.996044
 0.001626 0.001165 0.995583 0.001626
 0.213148 0.683131 0.078672 0.025049
 0.589702 0.123917 0.020511 0.265871

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Rel.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Rel/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n11.farnam.hpc.yale.internal
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FINALTIME:	1.56 seconds
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