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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.3 C 0.2 G 0.2 T 0.3 

MOTIF 1-RACCGTTA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 81 P= 1.3e-002
 0.359868 0.000448 0.512852 0.126833
 0.943897 0.000448 0.000448 0.055207
 0.000675 0.998202 0.000448 0.000675
 0.016241 0.901948 0.016014 0.065796
 0.000675 0.047147 0.951504 0.000675
 0.000675 0.016014 0.000448 0.982863
 0.109789 0.000448 0.000448 0.889315
 0.913953 0.000448 0.078480 0.007119

MOTIF 2-TATCGATA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 45 P= 4.9e-002
 0.251002 0.050056 0.006821 0.692122
 0.943644 0.024915 0.030380 0.001061
 0.001061 0.025210 0.000704 0.973025
 0.003401 0.963385 0.000704 0.032510
 0.032510 0.000704 0.963385 0.003401
 0.973025 0.000704 0.025210 0.001061
 0.001061 0.030380 0.024915 0.943644
 0.692122 0.006821 0.050056 0.251002

MOTIF 3-AGTGTGRC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 60 P= 9.5e-002
 0.919656 0.000611 0.078812 0.000921
 0.192619 0.000611 0.805849 0.000921
 0.043433 0.000611 0.213274 0.742682
 0.000921 0.107493 0.890665 0.000921
 0.000921 0.000611 0.000611 0.997857
 0.000921 0.000611 0.826706 0.171762
 0.365429 0.036009 0.576402 0.022160
 0.000921 0.997547 0.000611 0.000921

MOTIF 4-RACAGCTG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 36 P= 2.1e-001
 0.320002 0.138819 0.539953 0.001226
 0.877797 0.035109 0.029135 0.057959
 0.005426 0.980829 0.000814 0.012931
 0.985441 0.000814 0.000814 0.012931
 0.012931 0.000814 0.973324 0.012931
 0.001226 0.940184 0.057365 0.001226
 0.001226 0.000814 0.057365 0.940596
 0.029501 0.085913 0.855084 0.029501

MOTIF 5-ATTTGAAW STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 132 P= 6.1e-001
 0.658832 0.098490 0.000407 0.242272
 0.127354 0.056768 0.000407 0.815470
 0.000613 0.014551 0.000407 0.984428
 0.000613 0.116867 0.000407 0.882112
 0.000613 0.000407 0.998367 0.000613
 0.998573 0.000407 0.000407 0.000613
 0.974999 0.023981 0.000407 0.000613
 0.645465 0.000407 0.000407 0.353720

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Myb.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Myb/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n06.farnam.hpc.yale.internal
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FINALTIME:	1.86 seconds
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