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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.345 C 0.155 G 0.155 T 0.345 

MOTIF 1-ATATTTCC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 5.0e-001
 0.858516 0.138197 0.001021 0.002267
 0.002267 0.001021 0.001021 0.995691
 0.995691 0.001021 0.001021 0.002267
 0.231634 0.001021 0.046599 0.720746
 0.021134 0.046673 0.077681 0.854512
 0.026825 0.001021 0.001021 0.971133
 0.002267 0.994446 0.001021 0.002267
 0.002267 0.994446 0.001021 0.002267

MOTIF 2-TGCAACAC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 22 P= 5.0e-001
 0.053721 0.001145 0.052242 0.892892
 0.002541 0.001145 0.891413 0.104901
 0.104901 0.891413 0.001145 0.002541
 0.922919 0.052242 0.001145 0.023694
 0.922919 0.001145 0.052242 0.023694
 0.002541 0.839986 0.001145 0.156328
 0.944072 0.001145 0.001145 0.053639
 0.133903 0.811314 0.001145 0.053639

MOTIF 3-ACTARATA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 5.0e-001
 0.722739 0.002001 0.002001 0.273259
 0.004442 0.989115 0.002001 0.004442
 0.004442 0.002001 0.002001 0.991556
 0.991556 0.002001 0.002001 0.004442
 0.453922 0.002001 0.539635 0.004442
 0.991556 0.002001 0.002001 0.004442
 0.004442 0.002001 0.002001 0.991556
 0.991556 0.002001 0.002001 0.004442

MOTIF 4-CATAAATA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 5.0e-001
 0.031336 0.923209 0.014118 0.031336
 0.940427 0.014118 0.014118 0.031336
 0.031336 0.014118 0.014118 0.940427
 0.940427 0.014118 0.014118 0.031336
 0.940427 0.014118 0.014118 0.031336
 0.940427 0.014118 0.014118 0.031336
 0.031336 0.014118 0.014118 0.940427
 0.940427 0.014118 0.014118 0.031336

MOTIF 5-CTGTGTAG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 16 P= 1.0e+000
 0.069328 0.843743 0.034554 0.052375
 0.103179 0.169794 0.000757 0.726270
 0.001681 0.034554 0.894383 0.069382
 0.136867 0.000757 0.000757 0.861619
 0.069382 0.068350 0.826790 0.035477
 0.049468 0.000757 0.034554 0.915221
 0.878517 0.000757 0.068350 0.052375
 0.103397 0.034554 0.826572 0.035477

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Met.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Met/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n12.farnam.hpc.yale.internal
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FINALTIME:	1.79 seconds
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