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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.29 C 0.21 G 0.21 T 0.29 

MOTIF 1-GATGGCGC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 45 P= 2.5e-002
 0.033068 0.032705 0.932901 0.001326
 0.739538 0.000964 0.226431 0.033068
 0.001326 0.000964 0.128546 0.869164
 0.001326 0.000964 0.996384 0.001326
 0.001326 0.000964 0.938634 0.059076
 0.001326 0.932798 0.064549 0.001326
 0.014466 0.000964 0.919658 0.064912
 0.001326 0.964642 0.000964 0.033068

MOTIF 2-AAACGGWA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 50 P= 1.2e-001
 0.596598 0.076690 0.051383 0.275329
 0.972099 0.000768 0.026076 0.001057
 0.972099 0.026076 0.000768 0.001057
 0.001057 0.809163 0.188723 0.001057
 0.001057 0.000768 0.997117 0.001057
 0.195489 0.000768 0.802686 0.001057
 0.393649 0.000768 0.026076 0.579508
 0.581848 0.228616 0.127387 0.062149

MOTIF 3-ACATATCG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 37 P= 2.1e-001
 0.921112 0.001139 0.038660 0.039089
 0.001568 0.899267 0.097598 0.001568
 0.775962 0.016671 0.016671 0.190696
 0.001568 0.001139 0.038660 0.958633
 0.958633 0.001139 0.038660 0.001568
 0.001568 0.001139 0.038660 0.958633
 0.152380 0.844914 0.001139 0.001568
 0.039089 0.038660 0.883162 0.039089

MOTIF 4-CAGCACTG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 24 P= 7.0e-001
 0.002175 0.994069 0.001580 0.002175
 0.994664 0.001580 0.001580 0.002175
 0.002175 0.001580 0.994069 0.002175
 0.002175 0.942005 0.053644 0.002175
 0.740553 0.255692 0.001580 0.002175
 0.002175 0.994069 0.001580 0.002175
 0.002175 0.053728 0.053644 0.890453
 0.002175 0.001580 0.994069 0.002175

MOTIF 5-CTGAAAGG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 18 P= 1.0e+000
 0.002295 0.883716 0.001667 0.112322
 0.002295 0.001667 0.056592 0.939446
 0.112322 0.166974 0.663485 0.057220
 0.861607 0.001667 0.024404 0.112322
 0.994371 0.001667 0.001667 0.002295
 0.994371 0.001667 0.001667 0.002295
 0.002295 0.024404 0.794505 0.178796
 0.057308 0.001667 0.883805 0.057220

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Med.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Med/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n08.farnam.hpc.yale.internal
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FINALTIME:	1.47 seconds
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