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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.299 C 0.201 G 0.201 T 0.299 

MOTIF 1-RCACGTGY STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 99 P= 1.9e-002
 0.431806 0.077593 0.488101 0.002499
 0.017319 0.980494 0.000377 0.001810
 0.985734 0.003075 0.010628 0.000563
 0.001531 0.940649 0.001624 0.056195
 0.056195 0.001624 0.940649 0.001531
 0.000563 0.010628 0.003075 0.985734
 0.001810 0.000377 0.980494 0.017319
 0.002499 0.488101 0.077593 0.431806

MOTIF 2-GGTCACAC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 38 P= 1.2e-001
 0.027218 0.018236 0.927327 0.027218
 0.027218 0.018236 0.927327 0.027218
 0.027218 0.018236 0.018236 0.936309
 0.027218 0.927327 0.018236 0.027218
 0.936309 0.018236 0.018236 0.027218
 0.027218 0.927327 0.018236 0.027218
 0.936309 0.018236 0.018236 0.027218
 0.027218 0.927327 0.018236 0.027218

MOTIF 3-CTTCTTCT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 25 P= 2.4e-001
 0.001779 0.995249 0.001192 0.001779
 0.125364 0.001192 0.001192 0.872251
 0.001779 0.207167 0.001192 0.789861
 0.001779 0.995249 0.001192 0.001779
 0.166559 0.083582 0.001192 0.748667
 0.084169 0.001192 0.001192 0.913446
 0.001779 0.995249 0.001192 0.001779
 0.290543 0.042453 0.083648 0.583355

MOTIF 4-WCAGCTGW STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 27 P= 7.0e-001
 0.445120 0.001539 0.001539 0.551803
 0.002297 0.993868 0.001539 0.002297
 0.914785 0.054794 0.001539 0.028882
 0.108894 0.001539 0.807259 0.082309
 0.082309 0.807259 0.001539 0.108894
 0.028882 0.001539 0.054794 0.914785
 0.002297 0.001539 0.993868 0.002297
 0.551803 0.001539 0.001539 0.445120

MOTIF 5-TATCGATA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 48 P= 7.6e-001
 0.113863 0.065188 0.000738 0.820212
 0.976761 0.015028 0.007110 0.001101
 0.039458 0.000738 0.000738 0.959067
 0.004887 0.986902 0.000738 0.007473
 0.007473 0.000738 0.986902 0.004887
 0.959067 0.000738 0.000738 0.039458
 0.001101 0.007110 0.015028 0.976761
 0.820212 0.000738 0.065188 0.113863

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Max.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Max/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n10.farnam.hpc.yale.internal
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FINALTIME:	1.64 seconds
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