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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.329 C 0.172 G 0.172 T 0.329 

MOTIF 1-AAAATGTW STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 71 P= 2.5e-001
 0.971575 0.000652 0.000652 0.027121
 0.945001 0.000652 0.000652 0.053695
 0.907229 0.000652 0.090870 0.001249
 0.860493 0.074771 0.000652 0.064083
 0.067848 0.083974 0.027003 0.821175
 0.001249 0.058564 0.938938 0.001249
 0.001249 0.068396 0.000652 0.929703
 0.312025 0.016604 0.053440 0.617930

MOTIF 2-GATGKCGC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 41 P= 3.0e-001
 0.030297 0.000716 0.967617 0.001371
 0.753008 0.000716 0.215980 0.030297
 0.001371 0.000716 0.087539 0.910374
 0.100215 0.000716 0.897698 0.001371
 0.001371 0.000716 0.356543 0.641371
 0.001371 0.938691 0.029641 0.030297
 0.100215 0.000716 0.868773 0.030297
 0.001371 0.909579 0.087679 0.001371

MOTIF 3-CKTATAMG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 7.6e-001
 0.003886 0.990200 0.002029 0.003886
 0.003886 0.002029 0.660232 0.333854
 0.086011 0.084022 0.043025 0.786943
 0.992057 0.002029 0.002029 0.003886
 0.003886 0.002029 0.002029 0.992057
 0.786943 0.043025 0.084022 0.086011
 0.333854 0.660232 0.002029 0.003886
 0.003886 0.002029 0.990200 0.003886

MOTIF 4-AGTGTTGA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 37 P= 9.1e-001
 0.936143 0.031207 0.031207 0.001443
 0.001443 0.000753 0.996360 0.001443
 0.031897 0.000753 0.056421 0.910929
 0.093099 0.000753 0.904705 0.001443
 0.288721 0.000753 0.000753 0.709772
 0.245562 0.135469 0.013360 0.605608
 0.001443 0.000753 0.996360 0.001443
 0.488244 0.166218 0.104819 0.240719

MOTIF 5-GGTCAATG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 15 P= 1.0e+000
 0.002858 0.061803 0.907514 0.027825
 0.002858 0.001492 0.992791 0.002858
 0.002858 0.122503 0.001492 0.873147
 0.123674 0.751160 0.122308 0.002858
 0.933847 0.001492 0.061803 0.002858
 0.813225 0.061803 0.001492 0.123480
 0.063169 0.001492 0.061803 0.873536
 0.063169 0.001492 0.750965 0.184374

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Hsf.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Hsf/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n10.farnam.hpc.yale.internal
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FINALTIME:	1.70 seconds
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