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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.243 C 0.257 G 0.257 T 0.243 

MOTIF 1-CACGTGYC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 159 P= 3.5e-005
 0.000321 0.999018 0.000340 0.000321
 0.858578 0.000340 0.140760 0.000321
 0.021227 0.978111 0.000340 0.000321
 0.000321 0.000340 0.999018 0.000321
 0.000321 0.033964 0.000340 0.965375
 0.000321 0.000340 0.999018 0.000321
 0.055257 0.481200 0.123892 0.339651
 0.071750 0.927589 0.000340 0.000321

MOTIF 2-ACCACCCC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 33 P= 2.4e-001
 0.839567 0.077890 0.023459 0.059085
 0.075532 0.904668 0.001512 0.018288
 0.023373 0.892160 0.001512 0.082955
 0.963101 0.026170 0.001512 0.009217
 0.042158 0.873310 0.001512 0.083020
 0.001426 0.954904 0.001512 0.042158
 0.049988 0.925127 0.023459 0.001426
 0.247799 0.741472 0.001512 0.009217

MOTIF 3-GCAAACAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 38 P= 5.0e-001
 0.001314 0.001393 0.958461 0.038832
 0.152116 0.770141 0.038911 0.038832
 0.883917 0.097846 0.016924 0.001314
 0.973193 0.001393 0.016924 0.008490
 0.807884 0.038911 0.038972 0.114232
 0.001314 0.980448 0.016924 0.001314
 0.920864 0.038911 0.038911 0.001314
 0.904887 0.001393 0.001393 0.092327

MOTIF 4-AACCCTTT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 5.0e-001
 0.942722 0.001917 0.053553 0.001808
 0.838698 0.001917 0.157577 0.001808
 0.053444 0.942831 0.001917 0.001808
 0.001808 0.942831 0.001917 0.053444
 0.053444 0.839558 0.053553 0.053444
 0.053444 0.011793 0.001917 0.932846
 0.001808 0.053553 0.105356 0.839283
 0.053444 0.001917 0.105356 0.839283

MOTIF 5-AGGACWCG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 34 P= 8.8e-001
 0.996752 0.001104 0.001104 0.001041
 0.001041 0.030833 0.967085 0.001041
 0.001041 0.072965 0.882917 0.043077
 0.967023 0.001104 0.030833 0.001041
 0.060547 0.848024 0.001104 0.090325
 0.375770 0.001104 0.001104 0.622023
 0.001041 0.847592 0.001104 0.150264
 0.179060 0.030833 0.670006 0.120102

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Hey.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Hey/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n02.farnam.hpc.yale.internal
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FINALTIME:	1.93 seconds
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