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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.279 C 0.221 G 0.221 T 0.279 

MOTIF 1-GCTATCGA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 57 P= 4.8e-003
 0.181935 0.057947 0.684375 0.075744
 0.052205 0.808377 0.004968 0.134450
 0.027901 0.022974 0.000710 0.948415
 0.997684 0.000710 0.000710 0.000896
 0.010113 0.045310 0.000710 0.943867
 0.000896 0.952897 0.000710 0.045497
 0.000896 0.000710 0.988281 0.010113
 0.885968 0.000710 0.067826 0.045497

MOTIF 2-TGCCATCT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 50 P= 5.5e-002
 0.000983 0.210298 0.025186 0.763533
 0.098891 0.000778 0.874940 0.025391
 0.000983 0.972848 0.000778 0.025391
 0.000983 0.985052 0.000778 0.013187
 0.899750 0.074081 0.000778 0.025391
 0.109554 0.200233 0.098884 0.591329
 0.000983 0.948361 0.000778 0.049878
 0.000983 0.074239 0.049752 0.875026

MOTIF 3-GGTCACAC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 37 P= 1.2e-001
 0.001188 0.000940 0.996685 0.001188
 0.001188 0.000940 0.996685 0.001188
 0.001188 0.000940 0.000940 0.996932
 0.090108 0.907764 0.000940 0.001188
 0.967435 0.030437 0.000940 0.001188
 0.001188 0.937596 0.000940 0.060277
 0.967388 0.000940 0.000940 0.030732
 0.001188 0.848244 0.000940 0.149628

MOTIF 4-CATTTCCG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 57 P= 1.7e-001
 0.000901 0.997484 0.000713 0.000901
 0.669129 0.035290 0.294680 0.000901
 0.000901 0.155439 0.023129 0.820531
 0.023281 0.000713 0.000713 0.975292
 0.010166 0.000713 0.000713 0.988408
 0.010166 0.988220 0.000713 0.000901
 0.035478 0.958627 0.000713 0.005182
 0.000901 0.078736 0.865171 0.055191

MOTIF 5-GTTGCCAG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 31 P= 8.8e-001
 0.001743 0.001379 0.995136 0.001743
 0.088573 0.074166 0.001379 0.835882
 0.001743 0.001379 0.175959 0.820920
 0.045018 0.001379 0.951860 0.001743
 0.088433 0.821755 0.088069 0.001743
 0.001743 0.951860 0.044655 0.001743
 0.952224 0.044655 0.001379 0.001743
 0.001743 0.175320 0.777849 0.045088

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Ets97D.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Ets97D/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n09.farnam.hpc.yale.internal
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FINALTIME:	1.94 seconds
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