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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.296 C 0.204 G 0.204 T 0.296 

MOTIF 1-AAATAAAC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 49 P= 2.5e-002
 0.990162 0.000753 0.003101 0.005984
 0.864617 0.000753 0.103549 0.031081
 0.698996 0.026328 0.222351 0.052325
 0.001092 0.000753 0.000753 0.997402
 0.717165 0.155701 0.103549 0.023584
 0.971827 0.000753 0.026328 0.001092
 0.978731 0.014533 0.000753 0.005984
 0.001092 0.997063 0.000753 0.001092

MOTIF 2-AAATATTT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 13 P= 5.0e-001
 0.936000 0.018545 0.018545 0.026909
 0.936000 0.018545 0.018545 0.026909
 0.936000 0.018545 0.018545 0.026909
 0.026909 0.018545 0.018545 0.936000
 0.936000 0.018545 0.018545 0.026909
 0.026909 0.018545 0.018545 0.936000
 0.026909 0.018545 0.018545 0.936000
 0.026909 0.018545 0.018545 0.936000

MOTIF 3-ATGCACTG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 27 P= 5.0e-001
 0.995175 0.001398 0.001398 0.002029
 0.002029 0.144379 0.192347 0.661246
 0.002029 0.048905 0.899530 0.049536
 0.049536 0.879864 0.048905 0.021695
 0.928002 0.021064 0.001398 0.049536
 0.002029 0.994544 0.001398 0.002029
 0.002029 0.048905 0.001398 0.947668
 0.021695 0.001398 0.974878 0.002029

MOTIF 4-TAAATATG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 58 P= 6.7e-001
 0.001029 0.000709 0.000709 0.997552
 0.997552 0.000709 0.000709 0.001029
 0.545591 0.234733 0.218648 0.001029
 0.949272 0.000709 0.000709 0.049310
 0.224261 0.000709 0.000709 0.774320
 0.925015 0.073247 0.000709 0.001029
 0.149814 0.113629 0.024811 0.711746
 0.001029 0.000709 0.997232 0.001029

MOTIF 5-AACAGCTG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 20 P= 7.6e-001
 0.809062 0.002019 0.185990 0.002929
 0.855840 0.139211 0.002019 0.002929
 0.002929 0.992123 0.002019 0.002929
 0.924437 0.070615 0.002019 0.002929
 0.002929 0.070615 0.923526 0.002929
 0.002929 0.717517 0.276624 0.002929
 0.002929 0.002019 0.002019 0.993033
 0.002929 0.002019 0.992123 0.002929

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Esplm7-HLH.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Esplm7-HLH/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n03.farnam.hpc.yale.internal
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FINALTIME:	1.67 seconds
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