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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.318 C 0.182 G 0.182 T 0.318 

MOTIF 1-CAGTGTAT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 32 P= 3.0e-001
 0.001632 0.833401 0.144138 0.020828
 0.910374 0.015687 0.000938 0.073001
 0.008446 0.000938 0.953356 0.037259
 0.001632 0.000938 0.036565 0.960865
 0.001632 0.000938 0.995798 0.001632
 0.025384 0.216437 0.036565 0.721614
 0.925123 0.000938 0.072307 0.001632
 0.144832 0.144138 0.000938 0.710091

MOTIF 2-AGAGATGG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 25 P= 5.0e-001
 0.953474 0.001115 0.043470 0.001940
 0.001940 0.128591 0.740054 0.129416
 0.825999 0.043470 0.128591 0.001940
 0.001940 0.001115 0.995005 0.001940
 0.825999 0.001115 0.128591 0.044295
 0.001940 0.018649 0.001115 0.978296
 0.001940 0.043470 0.952649 0.001940
 0.086924 0.043470 0.782819 0.086787

MOTIF 3-ATACATTT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 82 P= 8.4e-001
 0.779641 0.037196 0.000853 0.182310
 0.001485 0.137418 0.000853 0.860245
 0.867839 0.033264 0.000853 0.098043
 0.001485 0.996177 0.000853 0.001485
 0.784050 0.000853 0.213612 0.001485
 0.105638 0.000853 0.000853 0.892656
 0.084586 0.033264 0.033264 0.848885
 0.001485 0.000853 0.000853 0.996809

MOTIF 4-AATCAAAG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 20 P= 9.5e-001
 0.860423 0.001185 0.046185 0.092207
 0.950569 0.046185 0.001185 0.002061
 0.002061 0.046185 0.001185 0.950569
 0.002061 0.994693 0.001185 0.002061
 0.860423 0.001185 0.091331 0.047062
 0.905423 0.001185 0.091331 0.002061
 0.724695 0.001185 0.136622 0.137498
 0.002061 0.001185 0.994693 0.002061

MOTIF 5-CTTGGAAA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 34 P= 1.0e+000
 0.033509 0.906729 0.008656 0.051105
 0.093827 0.039839 0.028317 0.838018
 0.059882 0.075291 0.023299 0.841527
 0.107564 0.039902 0.848398 0.004136
 0.023682 0.033586 0.902448 0.040285
 0.863665 0.008656 0.048104 0.079574
 0.628648 0.082952 0.240008 0.048392
 0.872390 0.000518 0.020178 0.106914

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Esplmγ-HLH.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Esplmγ-HLH/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n06.farnam.hpc.yale.internal
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FINALTIME:	1.93 seconds
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