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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.303 C 0.197 G 0.197 T 0.303 

MOTIF 1-ATCGATAA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 85 P= 1.2e-002
 0.900538 0.066562 0.032208 0.000691
 0.003880 0.008135 0.000449 0.987536
 0.016495 0.982365 0.000449 0.000691
 0.000691 0.016252 0.980018 0.003039
 0.982608 0.000449 0.016252 0.000691
 0.000691 0.000449 0.016252 0.982608
 0.987876 0.000449 0.010984 0.000691
 0.718972 0.010933 0.269404 0.000691

MOTIF 2-CTGGCAAC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 41 P= 5.5e-002
 0.001043 0.740900 0.216908 0.041149
 0.001043 0.000677 0.048443 0.949837
 0.024888 0.000677 0.949548 0.024888
 0.001043 0.125068 0.849001 0.024888
 0.024888 0.734176 0.000677 0.240260
 0.878072 0.120208 0.000677 0.001043
 0.925992 0.000677 0.000677 0.072654
 0.001043 0.945881 0.000677 0.052399

MOTIF 3-SGCGCCAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 136 P= 2.8e-001
 0.087248 0.546624 0.294226 0.071902
 0.000510 0.305787 0.693194 0.000510
 0.012158 0.928723 0.023665 0.035454
 0.028665 0.000331 0.958827 0.012176
 0.012195 0.986964 0.000331 0.000510
 0.000510 0.972874 0.026107 0.000510
 0.748922 0.124840 0.005153 0.121086
 0.902232 0.019049 0.031226 0.047492

MOTIF 4-AACAGCTG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 49 P= 3.0e-001
 0.996960 0.000859 0.000859 0.001323
 0.752723 0.000859 0.000859 0.245560
 0.001323 0.996495 0.000859 0.001323
 0.893605 0.000859 0.104213 0.001323
 0.001323 0.031104 0.966250 0.001323
 0.112783 0.885036 0.000859 0.001323
 0.061911 0.000859 0.000859 0.936371
 0.001323 0.065019 0.932335 0.001323

MOTIF 5-ATTYRAAT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 170 P= 3.9e-001
 0.614117 0.034943 0.169737 0.181203
 0.000441 0.000286 0.000286 0.998986
 0.000441 0.000286 0.000286 0.998986
 0.000441 0.397364 0.000286 0.601908
 0.601908 0.000286 0.397364 0.000441
 0.998986 0.000286 0.000286 0.000441
 0.998986 0.000286 0.000286 0.000441
 0.181203 0.169737 0.034943 0.614117

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Dp.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Dp/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n04.farnam.hpc.yale.internal
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FINALTIME:	1.91 seconds
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