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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.247 C 0.253 G 0.253 T 0.247 

MOTIF 1-AACCGGTT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 59 P= 2.5e-002
 0.899492 0.000754 0.099019 0.000736
 0.977078 0.000754 0.000754 0.021415
 0.000736 0.997775 0.000754 0.000736
 0.174120 0.534117 0.052636 0.239127
 0.239127 0.052636 0.534117 0.174120
 0.000736 0.000754 0.997775 0.000736
 0.021415 0.000754 0.000754 0.977078
 0.000736 0.099019 0.000754 0.899492

MOTIF 2-GAGAGCGA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 89 P= 8.5e-002
 0.006248 0.121158 0.867536 0.005057
 0.967335 0.006935 0.002648 0.023082
 0.058093 0.045534 0.873291 0.023082
 0.912754 0.056728 0.023102 0.007416
 0.075722 0.038301 0.876187 0.009789
 0.000794 0.853813 0.102512 0.042880
 0.000794 0.000814 0.996600 0.001792
 0.898475 0.000814 0.069848 0.030864

MOTIF 3-CATGCGCA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 5.0e-001
 0.001412 0.956113 0.001446 0.041029
 0.916334 0.001446 0.080808 0.001412
 0.001412 0.001446 0.001446 0.995696
 0.001412 0.080808 0.676735 0.241045
 0.080774 0.757644 0.080808 0.080774
 0.001412 0.041063 0.956113 0.001412
 0.041029 0.956113 0.001446 0.001412
 0.956079 0.041063 0.001446 0.001412

MOTIF 4-CTCAAAAG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 36 P= 5.0e-001
 0.009772 0.987121 0.001572 0.001535
 0.001535 0.193234 0.074008 0.731224
 0.001535 0.909225 0.044639 0.044602
 0.909187 0.001572 0.044639 0.044602
 0.909187 0.044639 0.044639 0.001535
 0.952254 0.001572 0.001572 0.044602
 0.865982 0.044639 0.001572 0.087807
 0.001535 0.001572 0.952292 0.044602

MOTIF 5-GCCAGAAA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 37 P= 8.8e-001
 0.088053 0.001306 0.909366 0.001275
 0.001275 0.888481 0.001306 0.108939
 0.088053 0.894558 0.001306 0.016083
 0.996114 0.001306 0.001306 0.001275
 0.145587 0.001306 0.816060 0.037047
 0.996114 0.001306 0.001306 0.001275
 0.584822 0.088084 0.254159 0.072935
 0.924453 0.001306 0.001306 0.072935

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Dif.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Dif/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n06.farnam.hpc.yale.internal
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FINALTIME:	3.25 seconds
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