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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.341 C 0.159 G 0.159 T 0.341 

MOTIF 1-AAATTGTA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 67 P= 1.6e-001
 0.997193 0.000678 0.000678 0.001451
 0.967678 0.000678 0.030193 0.001451
 0.786924 0.210947 0.000678 0.001451
 0.180829 0.030193 0.000678 0.788300
 0.074227 0.118832 0.022814 0.784128
 0.001451 0.000678 0.996420 0.001451
 0.044968 0.000678 0.148537 0.805817
 0.773504 0.030193 0.072275 0.124028

MOTIF 2-AGATGGCA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 43 P= 5.0e-001
 0.857218 0.024832 0.115155 0.002794
 0.002794 0.058139 0.936273 0.002794
 0.595571 0.058230 0.172355 0.173844
 0.002794 0.001305 0.001305 0.994595
 0.002794 0.001305 0.993106 0.002794
 0.002794 0.001305 0.993106 0.002794
 0.002794 0.936273 0.058139 0.002794
 0.823912 0.001305 0.115155 0.059628

MOTIF 3-TAAAAGTA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 17 P= 1.0e+000
 0.003631 0.001696 0.001696 0.992976
 0.992976 0.001696 0.001696 0.003631
 0.992976 0.001696 0.001696 0.003631
 0.992976 0.001696 0.001696 0.003631
 0.696123 0.298549 0.001696 0.003631
 0.003631 0.001696 0.991041 0.003631
 0.003631 0.001696 0.001696 0.992976
 0.992976 0.001696 0.001696 0.003631

MOTIF 4-AAACCGTT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 1.0e+000
 0.940073 0.014473 0.014473 0.030982
 0.940073 0.014473 0.014473 0.030982
 0.940073 0.014473 0.014473 0.030982
 0.030982 0.923564 0.014473 0.030982
 0.030982 0.923564 0.014473 0.030982
 0.030982 0.014473 0.923564 0.030982
 0.030982 0.014473 0.014473 0.940073
 0.030982 0.014473 0.014473 0.940073

MOTIF 5-GTTCGAAT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 37 P= 1.0e+000
 0.088368 0.036524 0.873353 0.001755
 0.087944 0.036524 0.036524 0.839007
 0.073164 0.000820 0.000820 0.925196
 0.001755 0.968891 0.000820 0.028534
 0.145791 0.000820 0.844804 0.008585
 0.818083 0.036524 0.072228 0.073164
 0.817738 0.036524 0.000820 0.144918
 0.145264 0.000820 0.000820 0.853095

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Dek.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Dek/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n05.farnam.hpc.yale.internal
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FINALTIME:	1.67 seconds
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