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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.347 C 0.153 G 0.153 T 0.347 

MOTIF 1-CCTAAAAG STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 30 P= 5.5e-002
 0.040585 0.879200 0.000854 0.079361
 0.001934 0.995278 0.000854 0.001934
 0.017935 0.234641 0.008246 0.739178
 0.841506 0.000854 0.078280 0.079361
 0.996358 0.000854 0.000854 0.001934
 0.996358 0.000854 0.000854 0.001934
 0.957707 0.000854 0.000854 0.040585
 0.001934 0.039505 0.762120 0.196441

MOTIF 2-ACACGAAT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 2.4e-001
 0.915394 0.024462 0.001239 0.058906
 0.002808 0.969923 0.024462 0.002808
 0.892171 0.057337 0.024462 0.026030
 0.002808 0.993146 0.001239 0.002808
 0.002808 0.001239 0.993146 0.002808
 0.882518 0.057337 0.001239 0.058906
 0.826420 0.057337 0.057337 0.058906
 0.228287 0.113615 0.057337 0.600761

MOTIF 3-ATGTAGAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 45 P= 5.0e-001
 0.917732 0.000865 0.079443 0.001960
 0.159370 0.000865 0.040028 0.799737
 0.001960 0.000865 0.828961 0.168214
 0.062466 0.000865 0.000865 0.935804
 0.996310 0.000865 0.000865 0.001960
 0.001960 0.000865 0.857668 0.139507
 0.935804 0.000865 0.000865 0.062466
 0.839470 0.040028 0.040091 0.080411

MOTIF 4-AAAGTCAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 15 P= 5.0e-001
 0.989772 0.002398 0.002398 0.005432
 0.881225 0.002398 0.002398 0.113980
 0.881225 0.002398 0.110945 0.005432
 0.005432 0.002398 0.986738 0.005432
 0.005432 0.002398 0.002398 0.989772
 0.005432 0.986738 0.002398 0.005432
 0.989772 0.002398 0.002398 0.005432
 0.989772 0.002398 0.002398 0.005432

MOTIF 5-GGAATAAA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 15 P= 1.0e+000
 0.003525 0.001556 0.991395 0.003525
 0.003525 0.001556 0.991395 0.003525
 0.993364 0.001556 0.001556 0.003525
 0.993364 0.001556 0.001556 0.003525
 0.003525 0.001556 0.001556 0.993364
 0.640324 0.001556 0.142635 0.215485
 0.922938 0.001556 0.071982 0.003525
 0.781404 0.001556 0.001556 0.215485

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/D1.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_D1/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n07.farnam.hpc.yale.internal
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FINALTIME:	1.55 seconds
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