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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.295 C 0.205 G 0.205 T 0.295 

MOTIF 1-GTAAAYAM STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 101 P= 9.0e-003
 0.000635 0.000441 0.998288 0.000635
 0.000635 0.000441 0.000441 0.998483
 0.747043 0.251881 0.000441 0.000635
 0.908486 0.090438 0.000441 0.000635
 0.983564 0.000441 0.000441 0.015554
 0.000635 0.619067 0.045222 0.335075
 0.883018 0.045294 0.024389 0.047299
 0.243120 0.400471 0.175245 0.181164

MOTIF 2-AGTGTTGG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 2.4e-001
 0.799849 0.043048 0.084995 0.072108
 0.024310 0.071562 0.902347 0.001781
 0.001781 0.001235 0.001235 0.995748
 0.001781 0.001235 0.995203 0.001781
 0.085676 0.169297 0.009233 0.735794
 0.001781 0.001235 0.001235 0.995748
 0.043593 0.001235 0.953390 0.001781
 0.127827 0.001235 0.869157 0.001781

MOTIF 3-CCAGAGAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 20 P= 5.0e-001
 0.195940 0.772855 0.001897 0.029309
 0.002734 0.928440 0.066092 0.002734
 0.929278 0.001897 0.066092 0.002734
 0.002734 0.001897 0.864039 0.131330
 0.929278 0.001897 0.066092 0.002734
 0.002734 0.001897 0.992635 0.002734
 0.929278 0.001897 0.001897 0.066929
 0.672085 0.066092 0.130493 0.131330

MOTIF 4-ATATTTAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 22 P= 7.0e-001
 0.837093 0.102795 0.028559 0.031554
 0.012052 0.014946 0.040191 0.932811
 0.850661 0.106318 0.021096 0.021926
 0.115623 0.065645 0.046786 0.771946
 0.062456 0.128385 0.081388 0.727771
 0.101778 0.082841 0.065884 0.749497
 0.890578 0.028504 0.046470 0.034448
 0.733897 0.093923 0.046733 0.125446

MOTIF 5-GTGGAGCT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 13 P= 1.0e+000
 0.003677 0.002551 0.990094 0.003677
 0.003677 0.175528 0.089040 0.731754
 0.003677 0.002551 0.990094 0.003677
 0.003677 0.002551 0.954348 0.039423
 0.730915 0.002551 0.002551 0.263982
 0.090027 0.002551 0.817394 0.090027
 0.003677 0.990094 0.002551 0.003677
 0.003677 0.002551 0.175528 0.818243

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Crg-1.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Crg-1/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n06.farnam.hpc.yale.internal
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FINALTIME:	1.74 seconds
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