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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.352 C 0.147 G 0.147 T 0.352 

MOTIF 1-TACATATA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 65 P= 5.0e-001
 0.001696 0.000710 0.000710 0.996885
 0.963535 0.034059 0.000710 0.001696
 0.001696 0.995898 0.000710 0.001696
 0.911378 0.000710 0.000710 0.087203
 0.165016 0.000710 0.090151 0.744124
 0.907390 0.090204 0.000710 0.001696
 0.054710 0.193693 0.052234 0.699363
 0.936210 0.000710 0.000710 0.062371

MOTIF 2-AACSAWAT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 28 P= 5.0e-001
 0.872588 0.000770 0.000770 0.125872
 0.996620 0.000770 0.000770 0.001840
 0.001840 0.887739 0.000770 0.109651
 0.001840 0.365115 0.631204 0.001840
 0.960432 0.000770 0.000770 0.038028
 0.329234 0.036958 0.073146 0.560662
 0.996620 0.000770 0.000770 0.001840
 0.001840 0.145638 0.000770 0.851751

MOTIF 3-AAAAATGT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 108 P= 5.0e-001
 0.763920 0.028574 0.000595 0.206911
 0.969408 0.000595 0.000595 0.029402
 0.836272 0.000595 0.161710 0.001423
 0.949178 0.000595 0.000595 0.049631
 0.658241 0.159684 0.180652 0.001423
 0.001423 0.140579 0.028574 0.829424
 0.001423 0.000595 0.996559 0.001423
 0.001423 0.000595 0.173602 0.824380

MOTIF 4-AACTCAAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 29 P= 7.0e-001
 0.741481 0.085710 0.043237 0.129572
 0.868900 0.000901 0.043237 0.086962
 0.002153 0.994793 0.000901 0.002153
 0.002153 0.000901 0.022069 0.974877
 0.002153 0.994793 0.000901 0.002153
 0.882501 0.000901 0.043237 0.073361
 0.876184 0.085710 0.018427 0.019679
 0.680773 0.043305 0.103602 0.172320

MOTIF 5-CTTAAGCC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 1.0e+000
 0.003864 0.838561 0.077603 0.079972
 0.003864 0.001617 0.001617 0.992902
 0.003864 0.001617 0.001617 0.992902
 0.916916 0.077603 0.001617 0.003864
 0.992902 0.001617 0.001617 0.003864
 0.079850 0.001617 0.838683 0.079850
 0.079850 0.838683 0.077603 0.003864
 0.079972 0.762331 0.001617 0.156080

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG8301.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG8301/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n07.farnam.hpc.yale.internal
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FINALTIME:	1.53 seconds
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