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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.301 C 0.199 G 0.199 T 0.301 

MOTIF 1-AAATATTT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 48 P= 3.0e-001
 0.996297 0.001056 0.001056 0.001591
 0.777210 0.046297 0.032670 0.143823
 0.799619 0.148526 0.050264 0.001591
 0.001591 0.001056 0.001056 0.996297
 0.996297 0.001056 0.001056 0.001591
 0.001591 0.050264 0.148526 0.799619
 0.143823 0.032670 0.046297 0.777210
 0.001591 0.001056 0.001056 0.996297

MOTIF 2-AAGCAAAT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 47 P= 3.0e-001
 0.996669 0.000950 0.000950 0.001432
 0.857124 0.033963 0.056476 0.052437
 0.001432 0.000950 0.916102 0.081516
 0.073985 0.890621 0.033963 0.001432
 0.980162 0.017456 0.000950 0.001432
 0.857567 0.107038 0.033963 0.001432
 0.698697 0.067082 0.100096 0.134125
 0.001432 0.037967 0.133322 0.827279

MOTIF 3-AATGTCWC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 39 P= 7.6e-001
 0.748686 0.093875 0.156097 0.001343
 0.953097 0.031852 0.000891 0.014160
 0.001343 0.124836 0.062814 0.811008
 0.001343 0.000891 0.996424 0.001343
 0.001343 0.000891 0.031852 0.965914
 0.053418 0.944348 0.000891 0.001343
 0.342918 0.000891 0.218120 0.438072
 0.156549 0.810256 0.000891 0.032304

MOTIF 4-ACAATTCG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 9.5e-001
 0.877069 0.080472 0.001139 0.041320
 0.001717 0.916093 0.001139 0.081050
 0.956401 0.001139 0.040742 0.001717
 0.717891 0.040742 0.080472 0.160896
 0.009292 0.017533 0.017533 0.955641
 0.041320 0.001139 0.001139 0.956401
 0.001717 0.995426 0.001139 0.001717
 0.001717 0.240683 0.636691 0.120908

MOTIF 5-AAACGATA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 1.0e+000
 0.763417 0.222129 0.001579 0.012875
 0.939592 0.001579 0.001579 0.057251
 0.774179 0.056450 0.001579 0.167793
 0.002380 0.883742 0.111498 0.002380
 0.002380 0.001579 0.993662 0.002380
 0.751611 0.056450 0.056450 0.135489
 0.002380 0.001579 0.001579 0.994463
 0.994463 0.001579 0.001579 0.002380

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG8089.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG8089/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n01.farnam.hpc.yale.internal
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FINALTIME:	1.71 seconds
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