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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.259 C 0.241 G 0.241 T 0.259 

MOTIF 1-ATCACGTG STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 97 P= 2.5e-002
 0.709668 0.021731 0.236531 0.032070
 0.000701 0.038307 0.200454 0.760537
 0.000701 0.960350 0.000655 0.038294
 0.979102 0.000655 0.019542 0.000701
 0.000701 0.743870 0.087276 0.168153
 0.000701 0.004250 0.932375 0.062674
 0.075947 0.155628 0.019451 0.748975
 0.000701 0.000655 0.966329 0.032315

MOTIF 2-CATATGTA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 24 P= 1.2e-001
 0.002059 0.860060 0.001922 0.135959
 0.828326 0.001922 0.057120 0.112632
 0.002059 0.001922 0.001922 0.994096
 0.938899 0.057120 0.001922 0.002059
 0.002059 0.001922 0.001922 0.994096
 0.002059 0.135822 0.860060 0.002059
 0.002059 0.001922 0.001922 0.994096
 0.994096 0.001922 0.001922 0.002059

MOTIF 3-GTGATAAG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 40 P= 5.0e-001
 0.013879 0.263022 0.670389 0.052710
 0.130958 0.014818 0.005840 0.848384
 0.000964 0.000900 0.997173 0.000964
 0.971406 0.000900 0.000900 0.026795
 0.000964 0.026731 0.013815 0.958490
 0.873367 0.104895 0.007859 0.013879
 0.969034 0.000900 0.026731 0.003336
 0.000964 0.078644 0.841684 0.078708

MOTIF 4-AGCAAACA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 49 P= 8.8e-001
 0.857787 0.041344 0.002820 0.098049
 0.072644 0.121677 0.780699 0.024981
 0.049218 0.893649 0.049080 0.008053
 0.925100 0.024921 0.000839 0.049140
 0.936207 0.013814 0.049080 0.000898
 0.958767 0.005445 0.010808 0.024981
 0.010618 0.856485 0.010808 0.122089
 0.929244 0.010808 0.010808 0.049140

MOTIF 5-GATTCCGA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 20 P= 1.0e+000
 0.001961 0.054399 0.919917 0.023723
 0.836502 0.054399 0.001831 0.107267
 0.107437 0.054399 0.001831 0.836333
 0.001961 0.001831 0.001831 0.994377
 0.054530 0.941678 0.001831 0.001961
 0.001961 0.994247 0.001831 0.001961
 0.213255 0.001831 0.782953 0.001961
 0.783595 0.160045 0.054399 0.001961

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG7987.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG7987/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n04.farnam.hpc.yale.internal
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FINALTIME:	1.85 seconds
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