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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.318 C 0.182 G 0.182 T 0.318 

MOTIF 1-AATGGAAA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 49 P= 2.1e-001
 0.957105 0.012487 0.000746 0.029662
 0.945364 0.012487 0.012487 0.029662
 0.070102 0.012487 0.032548 0.884863
 0.041372 0.009172 0.875243 0.074213
 0.034693 0.202207 0.589684 0.173415
 0.895217 0.091888 0.006171 0.006725
 0.912030 0.000746 0.029108 0.058116
 0.968846 0.000746 0.000746 0.029662

MOTIF 2-AAACAAAA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 36 P= 5.0e-001
 0.994273 0.001530 0.001530 0.002667
 0.994273 0.001530 0.001530 0.002667
 0.994273 0.001530 0.001530 0.002667
 0.002667 0.993137 0.001530 0.002667
 0.936097 0.001530 0.001530 0.060843
 0.896423 0.001530 0.001530 0.100517
 0.735368 0.001530 0.260435 0.002667
 0.994273 0.001530 0.001530 0.002667

MOTIF 3-AAACAAAT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 33 P= 5.0e-001
 0.995181 0.001288 0.001288 0.002244
 0.847845 0.001288 0.148624 0.002244
 0.787325 0.083626 0.001288 0.127761
 0.002244 0.994225 0.001288 0.002244
 0.882729 0.050242 0.050242 0.016787
 0.798415 0.001288 0.198054 0.002244
 0.995181 0.001288 0.001288 0.002244
 0.002244 0.001288 0.001288 0.995181

MOTIF 4-GATAAGCA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 27 P= 5.0e-001
 0.001670 0.000958 0.995701 0.001670
 0.996413 0.000958 0.000958 0.001670
 0.001670 0.156772 0.000958 0.840599
 0.923532 0.000958 0.000958 0.074551
 0.996413 0.000958 0.000958 0.001670
 0.001670 0.110456 0.849763 0.038111
 0.001670 0.667502 0.183278 0.147550
 0.512659 0.240460 0.016044 0.230837

MOTIF 5-AATGAGTG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 20 P= 1.0e+000
 0.711614 0.114652 0.057978 0.115756
 0.994439 0.001486 0.001486 0.002589
 0.002589 0.057978 0.171509 0.767923
 0.002589 0.001486 0.993336 0.002589
 0.994439 0.001486 0.001486 0.002589
 0.002589 0.001486 0.993336 0.002589
 0.025975 0.001486 0.001486 0.971053
 0.139630 0.228551 0.629230 0.002589

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG7045.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG7045/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n05.farnam.hpc.yale.internal
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FINALTIME:	1.57 seconds
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