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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.287 C 0.213 G 0.213 T 0.287 

MOTIF 1-CCGTTTCC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 2.4e-001
 0.088410 0.908470 0.001327 0.001792
 0.001792 0.908470 0.087946 0.001792
 0.196323 0.001327 0.800558 0.001792
 0.001792 0.258287 0.019227 0.720694
 0.045032 0.001327 0.001327 0.952314
 0.088271 0.001327 0.044567 0.865834
 0.045032 0.951849 0.001327 0.001792
 0.001792 0.995089 0.001327 0.001792

MOTIF 2-CGCAGACA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 51 P= 3.3e-001
 0.054771 0.943628 0.000682 0.000920
 0.000920 0.045151 0.841799 0.112130
 0.089716 0.842014 0.000682 0.067588
 0.836272 0.067350 0.045080 0.051298
 0.090474 0.089908 0.729687 0.089931
 0.766108 0.045151 0.045151 0.143590
 0.045389 0.774915 0.045080 0.134616
 0.991737 0.000682 0.000682 0.006900

MOTIF 3-ATTTGCAC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 33 P= 5.0e-001
 0.700367 0.103798 0.194510 0.001326
 0.014571 0.014227 0.000982 0.970220
 0.033321 0.000982 0.000982 0.964715
 0.033321 0.000982 0.000982 0.964715
 0.046530 0.065178 0.886966 0.001326
 0.009945 0.965242 0.006248 0.018565
 0.822818 0.014227 0.033029 0.129926
 0.033321 0.858381 0.016980 0.091319

MOTIF 4-AAATCAAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 53 P= 7.0e-001
 0.996873 0.000933 0.000933 0.001260
 0.935964 0.061843 0.000933 0.001260
 0.697344 0.000933 0.300462 0.001260
 0.001260 0.000933 0.302080 0.695726
 0.001260 0.825048 0.172433 0.001260
 0.879007 0.118799 0.000933 0.001260
 0.996873 0.000933 0.000933 0.001260
 0.693303 0.000933 0.000933 0.304830

MOTIF 5-AACAMCRA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 34 P= 9.5e-001
 0.996066 0.001174 0.001174 0.001585
 0.996066 0.001174 0.001174 0.001585
 0.001585 0.995655 0.001174 0.001585
 0.520468 0.208863 0.154318 0.116351
 0.613021 0.384219 0.001174 0.001585
 0.001585 0.995655 0.001174 0.001585
 0.648915 0.015950 0.333550 0.001585
 0.996066 0.001174 0.001174 0.001585

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG6765.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG6765/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n01.farnam.hpc.yale.internal
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FINALTIME:	2.17 seconds
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