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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.333 C 0.167 G 0.167 T 0.333 

MOTIF 1-GAAAAACC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 36 P= 5.0e-001
 0.002073 0.075281 0.848098 0.074548
 0.909675 0.044126 0.001036 0.045163
 0.909675 0.044126 0.001036 0.045163
 0.891699 0.018874 0.001036 0.088392
 0.952766 0.001036 0.001036 0.045163
 0.917090 0.018874 0.018874 0.045163
 0.002073 0.982018 0.001036 0.014874
 0.002073 0.819573 0.075281 0.103073

MOTIF 2-CTGAAGCA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 5.0e-001
 0.101701 0.894723 0.001192 0.002385
 0.002385 0.100508 0.001192 0.895916
 0.002385 0.001192 0.994039 0.002385
 0.746860 0.150407 0.050770 0.051963
 0.747340 0.001192 0.100349 0.151120
 0.002385 0.050770 0.745667 0.201178
 0.002385 0.994039 0.001192 0.002385
 0.846497 0.001192 0.001192 0.151120

MOTIF 3-AACTACAC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 27 P= 5.0e-001
 0.952042 0.044802 0.001052 0.002104
 0.908150 0.001052 0.088694 0.002104
 0.089747 0.669290 0.132727 0.108236
 0.002104 0.044873 0.088694 0.864329
 0.977681 0.001052 0.001052 0.020216
 0.081703 0.915141 0.001052 0.002104
 0.995792 0.001052 0.001052 0.002104
 0.222275 0.730818 0.044802 0.002104

MOTIF 4-GCAACAAC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 28 P= 1.0e+000
 0.027970 0.000842 0.875511 0.095676
 0.001686 0.946233 0.015350 0.036731
 0.856108 0.141364 0.000842 0.001686
 0.926538 0.070934 0.000842 0.001686
 0.001686 0.679131 0.000842 0.318341
 0.786017 0.000842 0.000842 0.212299
 0.947076 0.035888 0.000842 0.016193
 0.001686 0.995786 0.000842 0.001686

MOTIF 5-AGGAAAAC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 33 P= 1.0e+000
 0.740226 0.042139 0.083421 0.134214
 0.001979 0.000989 0.995052 0.001979
 0.001979 0.000989 0.978018 0.019014
 0.706662 0.208070 0.042139 0.043129
 0.996043 0.000989 0.000989 0.001979
 0.996043 0.000989 0.000989 0.001979
 0.954893 0.000989 0.000989 0.043129
 0.001979 0.895230 0.000989 0.101801

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG6276.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG6276/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c23n07.farnam.hpc.yale.internal
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FINALTIME:	1.75 seconds
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