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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.332 C 0.169 G 0.169 T 0.332 

MOTIF 1-AAATGTAT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 120 P= 1.9e-001
 0.905938 0.086318 0.000856 0.006887
 0.914122 0.022184 0.015440 0.048254
 0.936122 0.000856 0.015440 0.047581
 0.099691 0.036086 0.011323 0.852900
 0.093164 0.060111 0.786515 0.060209
 0.065010 0.000856 0.007595 0.926539
 0.825856 0.041679 0.024343 0.108122
 0.100777 0.015075 0.019839 0.864309

MOTIF 2-CARCCCTG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 34 P= 2.4e-001
 0.002003 0.994977 0.001018 0.002003
 0.911939 0.001018 0.085040 0.002003
 0.558091 0.001018 0.438888 0.002003
 0.002003 0.994977 0.001018 0.002003
 0.002003 0.994977 0.001018 0.002003
 0.002003 0.994977 0.001018 0.002003
 0.002003 0.001018 0.001018 0.995961
 0.002003 0.001018 0.994977 0.002003

MOTIF 3-CGTWGCCT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 5.0e-001
 0.002259 0.899845 0.095636 0.002259
 0.002259 0.001148 0.852450 0.144142
 0.191234 0.048392 0.001148 0.759225
 0.285873 0.048392 0.095636 0.570099
 0.002259 0.095636 0.899845 0.002259
 0.096747 0.899845 0.001148 0.002259
 0.002259 0.994333 0.001148 0.002259
 0.096747 0.048392 0.142879 0.711982

MOTIF 4-AAGWAAGC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 15 P= 7.6e-001
 0.727066 0.001618 0.001618 0.269697
 0.993579 0.001618 0.001618 0.003184
 0.003184 0.001618 0.992014 0.003184
 0.632287 0.001618 0.001618 0.364476
 0.738521 0.001618 0.229117 0.030744
 0.993579 0.001618 0.001618 0.003184
 0.003184 0.001618 0.992014 0.003184
 0.003184 0.992014 0.001618 0.003184

MOTIF 5-CAACTGCT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 1.0e+000
 0.002358 0.795912 0.001199 0.200532
 0.995245 0.001199 0.001199 0.002358
 0.847173 0.001199 0.050503 0.101126
 0.051662 0.861853 0.084126 0.002358
 0.150748 0.001199 0.001199 0.846855
 0.002358 0.001199 0.944781 0.051662
 0.022768 0.924371 0.050503 0.002358
 0.051662 0.001199 0.050503 0.896636

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG3281.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG3281/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n12.farnam.hpc.yale.internal
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FINALTIME:	1.74 seconds
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