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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.326 C 0.174 G 0.174 T 0.326 

MOTIF 1-MCCAACAA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 30 P= 1.2e-001
 0.433143 0.564322 0.000885 0.001650
 0.001650 0.819773 0.000885 0.177692
 0.001650 0.995815 0.000885 0.001650
 0.996580 0.000885 0.000885 0.001650
 0.715061 0.106362 0.000885 0.177692
 0.001650 0.906487 0.000885 0.090978
 0.996580 0.000885 0.000885 0.001650
 0.796915 0.106306 0.095129 0.001650

MOTIF 2-GTTGGCCA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 22 P= 2.4e-001
 0.106862 0.001310 0.889384 0.002444
 0.054485 0.001310 0.001310 0.942895
 0.002444 0.001310 0.001310 0.994936
 0.002444 0.001310 0.993802 0.002444
 0.054485 0.001310 0.837511 0.106694
 0.002444 0.941761 0.001310 0.054485
 0.002444 0.889552 0.001310 0.106694
 0.786267 0.053351 0.157937 0.002444

MOTIF 3-AAATARAW STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 106 P= 5.0e-001
 0.997024 0.000770 0.000770 0.001436
 0.997024 0.000770 0.000770 0.001436
 0.997024 0.000770 0.000770 0.001436
 0.001436 0.000770 0.000770 0.997024
 0.997024 0.000770 0.000770 0.001436
 0.543849 0.000770 0.453945 0.001436
 0.699405 0.000770 0.191772 0.108053
 0.659662 0.000770 0.000770 0.338798

MOTIF 4-ACAATAAC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 62 P= 5.0e-001
 0.973807 0.001104 0.001104 0.023986
 0.002059 0.927026 0.001104 0.069811
 0.911801 0.001104 0.023030 0.064065
 0.995733 0.001104 0.001104 0.002059
 0.274258 0.084374 0.023030 0.618338
 0.889733 0.001104 0.088950 0.020213
 0.995733 0.001104 0.001104 0.002059
 0.002059 0.994777 0.001104 0.002059

MOTIF 5-AAGTGCAA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 36 P= 7.0e-001
 0.890805 0.057132 0.044090 0.007973
 0.927111 0.014697 0.034309 0.023883
 0.001572 0.000843 0.996014 0.001572
 0.035038 0.000843 0.014697 0.949423
 0.102295 0.000843 0.856511 0.040351
 0.164915 0.776382 0.000843 0.057861
 0.862228 0.135358 0.000843 0.001572
 0.812245 0.067884 0.101566 0.018305

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG17801.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG17801/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n11.farnam.hpc.yale.internal
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FINALTIME:	1.58 seconds
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